Gene PsycPRwf_0952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0952 
Symbol 
ID5206369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1138667 
End bp1139098 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content44% 
IMG OID640599171 
Producthistidine triad (HIT) protein 
Protein accessionYP_001279852 
Protein GI148652759 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000117681 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00115812 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCATTA AGCATTACGA AGACGATAAT ATTTTTGCTA AGATTTTATC GGGTGATATC 
CCTTGTCACA AGGTATACGA AGATGACAAG ACCTTAGCTT TTATGGATAT CATGCCGCAA
GCTAAAGGTC ATGTGTTGGT TATTCCTAAA CAAAAAGCGG TAGAGCTTTC GCAGCTTGAG
CCTGAGTATG CCAGTGCGGT ACTGATGACG GCCAAAAAGG TAATGGCAGC ACAGCGTAAA
GTATTTGATC GTGAAGGCAT TATTCAAATG CAGTTAAATG GCGCTGAGGC AGGTCAAACC
GTCTTCCATT ATCATGTGCA TCTCATTCCC TCTAATATCC ATGAGCTGGG TAAACATGCT
GTGGTTCAAG CAGACATGGC AGAGCTTGCA CAGCAGGCTG AGCAGCTAGC AGCAGCGATT
GAGCACGCTT AA
 
Protein sequence
MSIKHYEDDN IFAKILSGDI PCHKVYEDDK TLAFMDIMPQ AKGHVLVIPK QKAVELSQLE 
PEYASAVLMT AKKVMAAQRK VFDREGIIQM QLNGAEAGQT VFHYHVHLIP SNIHELGKHA
VVQADMAELA QQAEQLAAAI EHA