Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0952 |
Symbol | |
ID | 5206369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 1138667 |
End bp | 1139098 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640599171 |
Product | histidine triad (HIT) protein |
Protein accession | YP_001279852 |
Protein GI | 148652759 |
COG category | [F] Nucleotide transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000117681 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00115812 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCATTA AGCATTACGA AGACGATAAT ATTTTTGCTA AGATTTTATC GGGTGATATC CCTTGTCACA AGGTATACGA AGATGACAAG ACCTTAGCTT TTATGGATAT CATGCCGCAA GCTAAAGGTC ATGTGTTGGT TATTCCTAAA CAAAAAGCGG TAGAGCTTTC GCAGCTTGAG CCTGAGTATG CCAGTGCGGT ACTGATGACG GCCAAAAAGG TAATGGCAGC ACAGCGTAAA GTATTTGATC GTGAAGGCAT TATTCAAATG CAGTTAAATG GCGCTGAGGC AGGTCAAACC GTCTTCCATT ATCATGTGCA TCTCATTCCC TCTAATATCC ATGAGCTGGG TAAACATGCT GTGGTTCAAG CAGACATGGC AGAGCTTGCA CAGCAGGCTG AGCAGCTAGC AGCAGCGATT GAGCACGCTT AA
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Protein sequence | MSIKHYEDDN IFAKILSGDI PCHKVYEDDK TLAFMDIMPQ AKGHVLVIPK QKAVELSQLE PEYASAVLMT AKKVMAAQRK VFDREGIIQM QLNGAEAGQT VFHYHVHLIP SNIHELGKHA VVQADMAELA QQAEQLAAAI EHA
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