| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0950 |
|---|
| Symbol | |
|---|
| ID | 5206367 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 1135772 |
|---|
| End bp | 1136671 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640599169 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001279850 |
|---|
| Protein GI | 148652757 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1806] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000034537 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00814679 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAATC TACTCAATAC TCTGTCGGTA AAACCCACCA TCCAAAATCG TAGTGCACTG
GCTGTCGATG ACAAGCCGCA AGTGATTCGG GTGGCCTTTT TTATCTCAGA TGGTACCGCC
ATTACGGCAG AGACCTTAGG CCGCTCTATC TTAAGCCAGT TCGCCAGTGT GCCTTTTGAG
ACGCGAGTTA TTCCTTATGT GGACACCATT GAGACAGCAG AGGCGGCGGT AAAACACATC
AATGAAGCCT ATCAGTCTAC CGGTATTCTG CCTTTGGTGT TTGATACCAT TGTGGATCCT
GATATTCGTG CGGTGGTGAA TTCTGCTCAG GCTTGTAATC TTGATATGTA TGAGGGATTA
ATTGGCCGTA TTACTGATGA GATAGGGGTA GAGCCAGACG GTCATTCAGG TCACGCCCAT
GATAATGTGG ACTCAGAAAC CTACAAATCT CGTATTGATG CGGTACATTT TGCACTAGAT
AATGATGATG GCGCTCGCAC CCGTCATTAT GATATGGCCG ATATCATTCT AATCGGGGTA
TCTCGATCTG GCAAAACGCC CACCTCTTTA TACTTAGCCT TACAGTTTGG TATTCGTGCC
GCTAACTATC CGCTGACCGA AGATGATTTG TTTGATAACC AGCTGCCCAA AGCGCTACAG
CCGCACCGTG GTAAATTGTT TGGTCTGATT ATTGATACTG AGCGTCTTCA AAAGATTCGA
CAAGAGCGCA GAGCCGGTAG TCGTTACGCC AGTTATAAAC AGTGTGAAGA GGAGCAGCGG
GCAATTCAGG CAATTTATAT GACCCAAAAT ATTCCCAGCC TAAATGTCTC TGAGATGTCG
GTCGAGGAGA TTGCTACCCG TATTTTACAA ATTACCGGAT TAAAGCGCCG TATTGGATAA
|
|---|
| Protein sequence | MENLLNTLSV KPTIQNRSAL AVDDKPQVIR VAFFISDGTA ITAETLGRSI LSQFASVPFE
TRVIPYVDTI ETAEAAVKHI NEAYQSTGIL PLVFDTIVDP DIRAVVNSAQ ACNLDMYEGL
IGRITDEIGV EPDGHSGHAH DNVDSETYKS RIDAVHFALD NDDGARTRHY DMADIILIGV
SRSGKTPTSL YLALQFGIRA ANYPLTEDDL FDNQLPKALQ PHRGKLFGLI IDTERLQKIR
QERRAGSRYA SYKQCEEEQR AIQAIYMTQN IPSLNVSEMS VEEIATRILQ ITGLKRRIG
|
|---|
| |