Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0948 |
Symbol | |
ID | 5206365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 1131756 |
End bp | 1132586 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640599167 |
Product | RDD domain-containing protein |
Protein accession | YP_001279848 |
Protein GI | 148652755 |
COG category | [S] Function unknown |
COG ID | [COG1714] Predicted membrane protein/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000870285 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.142163 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGATTT ATCTAGCAAG AAACCAAGTT CAGGCGGGTC CTTACACGCT CACAGAGCTC AATAATATGC TTGCCACCGG TCAGGTAGAC TTAAGTGATC TGATGTGGCA TGCCGGTATG GAACAGTGGC AGCAAGTTGG TGAAATGACC CAAGGCAAAA ATCACTACAA CCCAAATGGC AGCATAAGCT CAGTACCGCC AAAGCGAGTG TCTGTGGCTG AGCTTTATGG CAAAAAAGAG TCTCATTCGA CTACATCGCC CTCAGGCAAT AAGCCTTTTA ATATCAATAA GCCAGTTAGT CTAAAAAAAC AGACCGCCAG CATGGCCGCT CCCACACAGC TGGCCAGCAT TAGCAGCCGA GTTTTTGCGG TACTGCTCGA CGCTTTATTA TTTTTGGCCT GCTACTTACC CTTTTTGTCA GGCTTAAATT ATGATTTTGC AAAAATTACC GCCACCAATG GCGACATGGA AAAAATGACC CAATTGGCGC AATCGGTTCC TGAGCATTTA AGCTCAATGA CCTCGATTAT GTTTTTGGCG CTGTTTGCCA TTCAGCTGAT CTTATTACTA AGACGTGGGC AGACCATTGG TAAATTGGTG AATGGTATTC GTATTGTTGA TGAGCAGTCA AAAAAACTGG CTTCAGCGAC TCAGGTTATT TTAATGCGCA GCGTCATTAC GTCAGCACTG TATATTCTAC CCATGGTAGG CCCTATAATT TTATTGGCTG ATTTTGTGGT GATGACTATA AATAAAGAGC GCCGCAGTAT TCACGATAGG ATTGCCAAAA CCAGAGTGGT TAAAGCCGAT CCTAAGCAGT TAGAAAAATA A
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Protein sequence | MQIYLARNQV QAGPYTLTEL NNMLATGQVD LSDLMWHAGM EQWQQVGEMT QGKNHYNPNG SISSVPPKRV SVAELYGKKE SHSTTSPSGN KPFNINKPVS LKKQTASMAA PTQLASISSR VFAVLLDALL FLACYLPFLS GLNYDFAKIT ATNGDMEKMT QLAQSVPEHL SSMTSIMFLA LFAIQLILLL RRGQTIGKLV NGIRIVDEQS KKLASATQVI LMRSVITSAL YILPMVGPII LLADFVVMTI NKERRSIHDR IAKTRVVKAD PKQLEK
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