Gene PsycPRwf_0942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0942 
Symbol 
ID5204939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1127160 
End bp1127492 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content46% 
IMG OID640599161 
Productpreprotein translocase, YajC subunit 
Protein accessionYP_001279842 
Protein GI148652749 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.129581 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.442313 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTAT TTATTCAAGC GGCCCACGCG GCTCCAGAAG CGGCCGGTGG CCCTGCTATG 
ATTATGCAAT GGATTTTCCC ATTAGCCATT TTCGCAATTT TTTACTTTTT GGTGATCAGA
CCTCAGTCAA AACGCGCCAA AGAGCACCGC AATATGGTGG ACTCGTTGGC TGTTGGCAAC
GAAGTTATCT TCGCTGGCGG CTTAATGGGC AAAATCAAAT CTATTGAAGG CGACTACGCG
GTAGTTAGCC TAAACGATAG AAACGACGTA ATGATACAAC GTGCTTCTGT CATCTCAGTT
TTGCCAAATG GCACAATTGA TGGCTTGCAA TAA
 
Protein sequence
MSLFIQAAHA APEAAGGPAM IMQWIFPLAI FAIFYFLVIR PQSKRAKEHR NMVDSLAVGN 
EVIFAGGLMG KIKSIEGDYA VVSLNDRNDV MIQRASVISV LPNGTIDGLQ