| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0940 |
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| Symbol | secF |
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| ID | 5204937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 1123805 |
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| End bp | 1125001 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640599159 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_001279840 |
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| Protein GI | 148652747 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.494806 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAATA ACAATCAAAA CGACCAACCG AACAACACGC CAGGCGGCTC ACATCCTGAC
TATATCGAAG GCGGTCGTCG CCGCAGACGT GGCCCTCGCC GTGATGGTAA AAATAACAGC
TCAAATCGCA GTGCGGTGTC AGAGTCTACA GACTTAACCA CCTCTCAAGA TTTAGCAGCC
AGCAATGGCT TTGATGCAGA CGTCTATGAA GATGAAGCCG CTTTAGCCGA AGGGGGCATT
AAAGCGGTAG GTTCTAAGCG CATCATCCCC TTCATGAAGC TTGAAAAGCC GATGGCTATT
TTTTCAATTC TGATGGTTTT GATCAGTATC GGTGCGCTGT TCATTAATGG TTTGAATTTA
GGGCTAGACT TCACCGGTGG TGTCTCAGCA GATGTCAAAT ATGAAAATCC AGTAGAGCAG
ACTGAGGTCA TTCAGTCTCT AGAGAAATCT GGATTTGATG ATGCTGTCGT ACAGTATCTT
GGTGGTACTA CTGAGCTTTT GGTACGTCTA CCCCCTCAGT CAGATAACGT GGCTGGCCTT
AATGAAAGCT TAGGTAAAGC ATTGGATTTA CCAGGTAACA ATGCTGAAAT TAGCAATGTA
AACATCATTG GTAGTCAGGT GGGCAGCGAG GTATATCTTA GCTCACTCAT TGCCATCGTC
ACAGCGTTGG GCATGATGAT GCTGTACGTT GCGGTTCGCT TCCAGTTCAA GTTGGCTGTG
GGCGCTTTAT TGGCCCTAGT GCATGATGCC GTTGTTACTT TAGGGGTGTT TGCGTTATTT
CAGTTTCCAT TTGACTTGAC TGTATTAGCC GCCATCTTGG CGTTAATCGG TTACTCATTG
AACGATACCA TTGTTGTGTT TGACCGTATC CGTGAGAACT TCAGACGGGT GCGTGATGCC
AGCCCAAGGC AAATCATTGA TTTATCGCTC ACAGAGACCT TACGCCGTAC TATTATGACC
GTATCTACGG TATTGGTTGT GGTATTGGCG ATGCTGTTCT TAGGCGGTGC CGGCCTATAC
TGGTTCTCCT TCGCCTTCTT CATCGGTCTG ATTGCAGGTA CTTATTCTTC TACGTACATC
TCAAGCTCAA TCCCGTTAGC CTTAGGCTTA TCGCGTGATG ACTTCGTCGT AAAAGTTAAG
CCTGAATTCC AAGAAGAAGT GGTCAGCTTC AACGACCCTA AGGCTTTTGA AGACTAA
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| Protein sequence | MSNNNQNDQP NNTPGGSHPD YIEGGRRRRR GPRRDGKNNS SNRSAVSEST DLTTSQDLAA
SNGFDADVYE DEAALAEGGI KAVGSKRIIP FMKLEKPMAI FSILMVLISI GALFINGLNL
GLDFTGGVSA DVKYENPVEQ TEVIQSLEKS GFDDAVVQYL GGTTELLVRL PPQSDNVAGL
NESLGKALDL PGNNAEISNV NIIGSQVGSE VYLSSLIAIV TALGMMMLYV AVRFQFKLAV
GALLALVHDA VVTLGVFALF QFPFDLTVLA AILALIGYSL NDTIVVFDRI RENFRRVRDA
SPRQIIDLSL TETLRRTIMT VSTVLVVVLA MLFLGGAGLY WFSFAFFIGL IAGTYSSTYI
SSSIPLALGL SRDDFVVKVK PEFQEEVVSF NDPKAFED
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