| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0939 |
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| Symbol | |
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| ID | 5204936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 1122156 |
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| End bp | 1123586 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640599158 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001279839 |
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| Protein GI | 148652746 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.652597 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCAAG ACTCAGCCGC TCCCCTCAAT CTTAGTTATC GTCATATCAT TGCTATTGCC
GCCCCTGTAC TGATTGCTAA TCTTGCAATG CCACTACAAG GCGCTATTGA CGTGGGTGTG
GTGGGCCATT TTCCAAGCTC TTATAATTTG GCCGGCTTAG GCATTGCCTC ACAGCTGTGG
CTACTTATCT TAGTCAGCTT TAATTTTTTG CAATATGCGT CATCTGGTCT TGCCGCTCAA
GCTTTGGGTC GACAAGCCAG CGGATTAGCT ACGCCCAATG AGCTGGCTGA TATCTTGTAC
CGCTCCTTGG GTCTTGCGCT GATATTGGCG GCGCTACTGT GGGTATGTCG ACCCTATATC
TTGAGTCTGG GCCTTGACTT ACTCGGTGCG CAGCCAAACA GCAGTGCAGC TGCTCATACC
TACTTAAGCG TGCGCTACTA TGGCCTTGTG TTTGAGCTGA TGAACTACGC TTTTATTGGT
TGGTTTGCCG GACAAGGCCG AACCAATCAA ATGATGATGG TGCAGCTGCT TATTTCTATC
ATTAATATTG TGCTCACTTT AAGCTTTGTG TATCTGTTTG ATATGGGTCT TGAAGGCGTG
GCTTTGGGCA CAGTCATCGG CTATGCATCC GGCTGTGTCA CCGCCCTTAT TTTGGCCAAA
AAAAGCTTGG CAAGTATAAG CTTGGCAAGC ATAAGTACCG CCGCCTCGCC CCACAAAGCT
TTGGCGTCAC CCCCGCCCCA AGACTTAATG CTTAGGCTCA AACAAATTTA TGCCGCTGAT
AAAATGCTCA GCTTGTTTTC TTTGAACAAA GACATTTTTA TCCGCACCAT TTTGCTTACC
TTAAGTTTTG CTTGGATCAC TCGTCTATCG GCTCAGCAAG GCGACTTGGT GATGGCCACT
AATGCACTGC TGCTACAAGT ACTTAGTATC TCCGCTTTTG CGTTAGATGG GGTTGCTGTG
GCAGCTGAGA GCTTATCAGG ACAGGCGGCT GCGCGTAAGG GTCGTGATCA GTTTATCACT
GCACTCAAGC GTACTGGTGT CATTACATTT CTATTGGCCT TATCGTTAAG CATCATTTGG
GCGTTTGTTT TGCCTTATTT TTTAAGCCTA ATGACCGACT TGCCAGCGGT ATATGACTTG
GCCATAGAGT ATCGTTATGT GGCCACGTTA CTGCCATTAA TGGGCGCTGG TGCTTATTGG
CTAGATGGCA TCATGTTTGG CTTAACTGCA GGATCAAAAA TCCGTCAAGT GGCCATTATC
GTGTCGGCTA TCTTCTTTCC TTTAACCTAT ATAGTGTACG CACTTTATGG GTCTGAGCAT
GCCATGCTGG TCATCTGGTT TGGGGTTTAT TGGTTATTAG CTTCTCGCTT TATGGTGGCC
GCTATTGTCT TATGGCGCAA CCAAGATGTA TTAATTTATA ATAAAAACTA A
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| Protein sequence | MTQDSAAPLN LSYRHIIAIA APVLIANLAM PLQGAIDVGV VGHFPSSYNL AGLGIASQLW
LLILVSFNFL QYASSGLAAQ ALGRQASGLA TPNELADILY RSLGLALILA ALLWVCRPYI
LSLGLDLLGA QPNSSAAAHT YLSVRYYGLV FELMNYAFIG WFAGQGRTNQ MMMVQLLISI
INIVLTLSFV YLFDMGLEGV ALGTVIGYAS GCVTALILAK KSLASISLAS ISTAASPHKA
LASPPPQDLM LRLKQIYAAD KMLSLFSLNK DIFIRTILLT LSFAWITRLS AQQGDLVMAT
NALLLQVLSI SAFALDGVAV AAESLSGQAA ARKGRDQFIT ALKRTGVITF LLALSLSIIW
AFVLPYFLSL MTDLPAVYDL AIEYRYVATL LPLMGAGAYW LDGIMFGLTA GSKIRQVAII
VSAIFFPLTY IVYALYGSEH AMLVIWFGVY WLLASRFMVA AIVLWRNQDV LIYNKN
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