| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0934 |
|---|
| Symbol | |
|---|
| ID | 5204523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 1116567 |
|---|
| End bp | 1117601 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640599153 |
|---|
| Product | dihydroorotate dehydrogenase 2 |
|---|
| Protein accession | YP_001279834 |
|---|
| Protein GI | 148652741 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0167] Dihydroorotate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01036] dihydroorotate dehydrogenase, subfamily 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTACG CCTTACTACG CCCTTTCTTA TTTAATTTAG ATCCTGAACA TGCTCATGAG
CTTACGCTGC AACTGTTAGA AAAAGCGCAC AAAGCTCGGG CGCTTGGTTT TATCTATTCT
CAGCAGTCTT TGCCGACTGA ATGTATGGGT TTGCAGTTTT CAAACCCTGT GGGATTGGCA
GCCGGCTTAG ATAAAAATGG TCAATATATT GATGCGTTGG CTGAGCTTGG TTTTGGCTTT
ATCGAAGTGG GTACTGTGAC GCCAAGACCG CAGCAAGGTA ATGAAAAACC GCGCTTATTT
AGAATCAAAG AGGCCGATGC GATTATCAAC CGTATGGGCT TTAATAATCT AGGGGTGGAT
CGCTTAATCC AGAACGTTCA GCGTGCAAAA TACAAAGGCA ATATCGGCAT AAATATTGGA
AAAAATGCAG TGACGCCGGT TGAAAATGCC GCCGATGACT ACATATATTG CTTAGACCGC
GTATATCCTC ATGCCTCTTA TATTACGGTC AATATCTCCT CTCCAAACAC CAAAAATCTA
CGTGACTTGC AAAGTGGTGA GGCCTTAACT GAGCTGCTAG ACAGCATAAA AAACCGTCAT
AGTCAGCTGG CAACAGAGTA TGGGTTTTAT GTGCCCATGG TGCTAAAAGT AGCACCAGAC
TTAACCCCTG AGCAGGTCGA TTATATTGCC AACCAGCTTA TTGAATTTGA TATTGATGGC
TTGATTGCTA CCAATACTAC GTTAAGTAGA ACAGGGGTAG AGGACTTGCC GTTTGGTGAT
GAGGCAGGTG GACTCTCAGG TCGCCCTGTG GGTCATCTAA GTACCCAGAT TATCGAACAG
TTTTATGAGC GACTAGAGGG TAAGGTGCCT ATTATTGGGG TTGGCGGTAT TGATAGTGGA
GATAAGGCGG TACGTAAGTT AAACGCTGGC GCTACCATGA TACAGCTGTA CAGCGGTATG
ATTTATCAAG GGCCAAAACT GGTGCAGCAG TGTGTCGAAG CCATTACCAG TCATCGTGAT
GCCATGATGC TTTAG
|
|---|
| Protein sequence | MSYALLRPFL FNLDPEHAHE LTLQLLEKAH KARALGFIYS QQSLPTECMG LQFSNPVGLA
AGLDKNGQYI DALAELGFGF IEVGTVTPRP QQGNEKPRLF RIKEADAIIN RMGFNNLGVD
RLIQNVQRAK YKGNIGINIG KNAVTPVENA ADDYIYCLDR VYPHASYITV NISSPNTKNL
RDLQSGEALT ELLDSIKNRH SQLATEYGFY VPMVLKVAPD LTPEQVDYIA NQLIEFDIDG
LIATNTTLSR TGVEDLPFGD EAGGLSGRPV GHLSTQIIEQ FYERLEGKVP IIGVGGIDSG
DKAVRKLNAG ATMIQLYSGM IYQGPKLVQQ CVEAITSHRD AMML
|
|---|
| |