Gene PsycPRwf_0930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0930 
Symbol 
ID5206239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1113095 
End bp1113802 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content49% 
IMG OID640599149 
Productnitroreductase 
Protein accessionYP_001279830 
Protein GI148652737 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00302341 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAATAT ATAAAGGGAT AGGATATAAA AAATCAGAGG ATATTATGAT GAATAACACC 
CTGCAGGACG AGTTTGAAAC CAGCGATCAA CGGGCGGATG CGACGCAAAT ACAGTCGGCT
AAGGTGAGTG ATGAGCAAGT TATCAACTGG ATTAAATCTC GCCGCAGTAT TGGCAATTTA
AGTATTCCTG CGCCCACGAA GCGGCAGCTT GAGGCCGCCA TTGAATGTGC CATGAGCGCC
CCAGATCATA AGAAGCTACA GCCTTGGCGC TTTACCGTTA CTCAAGGGCA GGCAAGACAT
GAGTTAGGCC GAGCCTTATT GGCAGCAGCA CAGGCTAAAG CTTTGCGTGA GGGCAGTGAG
CTTGATGAAC GTAGCGCAGA GAAAACCTTA AAAATGCCGC TGCGGGCGCC CGTTATTATC
ACGGTAGTGA CACGGATGAG ATATCATGAA AAAGTGCCTG CCTTTGAGCA GCTATTAAGT
AGTGGCGCCG CTGTACAAAA TCTTATCTTG GCACTGCAAG CTCAAGGCTT TAGCACGGTT
TGGCGTACGG GGCCTTTGGC CAATGAGCCT GCCGTAAAAA GCTACTTTAA TGTGGGTGCA
GAAGATTATA TAACCGCCTT TGTCTATGTG GGCAGCAGCC ACTGTGCCAT GCCTGCCCGC
GGTGACATTG ATACCCAAGG CTTTGTGACT TATCAAAACG GATTATAA
 
Protein sequence
MPIYKGIGYK KSEDIMMNNT LQDEFETSDQ RADATQIQSA KVSDEQVINW IKSRRSIGNL 
SIPAPTKRQL EAAIECAMSA PDHKKLQPWR FTVTQGQARH ELGRALLAAA QAKALREGSE
LDERSAEKTL KMPLRAPVII TVVTRMRYHE KVPAFEQLLS SGAAVQNLIL ALQAQGFSTV
WRTGPLANEP AVKSYFNVGA EDYITAFVYV GSSHCAMPAR GDIDTQGFVT YQNGL