Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0907 |
Symbol | ksgA |
ID | 5204771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 1079786 |
End bp | 1080676 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640599126 |
Product | dimethyladenosine transferase |
Protein accession | YP_001279807 |
Protein GI | 148652714 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000552021 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCAAT CAGACATTAC AAAACATCCG TTACACAATA CCCTGCAGCG GGCAGCCAAG CACCAGCCTC GCAAACGCTT TGGGCAAAAC TTCTTGCATG ATGCCAGTAT TATCAGTGAA ATTGTTGACG CTATTGGGCT TAATCGTGAT GATAACTTGG TTGAGATTGG ACCAGGGATG GGCGCTTTAA CTGAGCCGCT GCTAGAGCAA GTTGATGCGA TGACCGTCAT TGAGCTTGAT CGTGACTTGG CAGGCAGTTT ACGCATCCGT ATTGGGGCCA ACAGTCATCC AAATTTCACC ATCGTGAATG CCAATGCGAT GCAATTTGAT TACCATAGCT TGTATGATGC TGACAGTGAA ACTCCAAAAA AACTGCGTGT GGTCGGTAAC TTGCCCTACA ATATCTCAAC GCCCTTGTTG TTCACCTTGC TTGAGTATGC CGATATTATT GAAGACATGC ATTTTATGCT ACAAAAAGAG GTGGTGGAGC GCATTACCGC AGAAGTGGGC AGTAAAATAT ATGGCCGTTT ATCGGTAATT ATGCAGTATT TTTGTGACAC CCAATATTTA TTAACGGTAC CCAGAGGTGC CTTTAATCCG CCACCAAAAG TGACCAGTGC TGTGTTCCGT CTGCGCCCAC ATCAGGTGAA GCCGGTGCAA GCTGACGATG AAAAACTGTT CGCTTTGGTG GTGCGCGAAA CCTTTAATCA TCGCCGCAAA ACCTTGCGTG CTATTTTTAA ACAGTCCTCA CTCATGCCCA CGTTGACCGA TGAGGATCTG GCGAGCATAG GCATTGATGG CAATGCGCGT CCTGAAACTT TGGATGTGAA TGATTTTGTG GCGCTCAGTA ACTTGGTGAT TGCTAAGCAA GCAGAGCAAG AGCAGCTGTA G
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Protein sequence | MTQSDITKHP LHNTLQRAAK HQPRKRFGQN FLHDASIISE IVDAIGLNRD DNLVEIGPGM GALTEPLLEQ VDAMTVIELD RDLAGSLRIR IGANSHPNFT IVNANAMQFD YHSLYDADSE TPKKLRVVGN LPYNISTPLL FTLLEYADII EDMHFMLQKE VVERITAEVG SKIYGRLSVI MQYFCDTQYL LTVPRGAFNP PPKVTSAVFR LRPHQVKPVQ ADDEKLFALV VRETFNHRRK TLRAIFKQSS LMPTLTDEDL ASIGIDGNAR PETLDVNDFV ALSNLVIAKQ AEQEQL
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