| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0871 |
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| Symbol | |
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| ID | 5204826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 1032227 |
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| End bp | 1033444 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640599092 |
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| Product | ABC transporter related |
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| Protein accession | YP_001279773 |
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| Protein GI | 148652680 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.010866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000984124 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAACCA GCCCCAATCG CAGTGTGAAT CATTCTTTTG AAAATGTGAA CCATGAGGAT
AGTGCAGATT ATTTAGTGCT TGATAATATC AGTGTCAGCT TTGGTCATAC TGAGGTGGTA
AAGTCATTAT CGATGCGTTT GAACCAAGGC GACATCGGCT GTTTGCTTGG ATTTAGTGGC
TGTGGTAAGA CCACGGCTTT GCGTGCCATC GCTGGTCTTG AGCAGCCGCA TCAAGGTAGG
GTGGTGCTCA ATGGCAAAAC CTTAACTGAT ATTAATCAAG GTAAGGTTAC TGTACAGGTT
ATGCCAGCTA AGCGTGATAT GGGTATGGTG TTTCAAGACT ATGCACTGTT TAGCCATCTG
ACAGTCAGTG AAAATATTGG CTTTGGTTTA CACCGCTGGA GTAAGGCAGA TAAGGCGGCA
CGTATACAAG AGATGCTAGA GTTGGTGGAA TTGACTGAAC ACGCCAACAA GCGTATCAAT
CAGCTCTCAG GTGGTCAGCA GCAGCGCATT GCTTTAGCGC GCGCTTTGGC GCCTAAGCCT
GAGCTGTTAT TACTTGATGA GCCATTTTCA AACCTAGATA TGATGCTGCG TGAGTCATTA
GCAGCCAAGG TGCGAGACAT CCTAAAGCGC ACCCATACCA CGGCCATCTT AGTCACCCAC
GATCAGCATG AAGCCTTTGC TATTGCTGAT AAAATTGGGG TGATGCATAA CGGTAAGCTT
GCACAGTGGG CGACCCCTGA TGAGCTGTAT CATGAGCCAA GCAGTCCATT TATCGCCGAG
TTTATCGGGG AGGGGGCTAT GATTGATGGG GTCATTGAAC AAGGTGTTAT CAAGACTGCA
CTGGGGGATA TTAAGCGCTA TCCTGAGCCG ATTCATGCCA CTCATAAAGG CTTTGACTAT
GATACTTATT TTAGCCAAGG TGAGGTGTGT GAGTATGACT TTCCTAATGG CACCAAGATT
AAAGTGCTCA TTCGCCCAGA TGACATAGTA CATGATGATC ATAGCCCTCA GCGTGCCATG
GTAGTAGAGC GGGTGTTTCG CGGTGCCAAC TTCTTATATC GTCTGCGTTT GGATAATGGC
GAGGAAGTGC TGTCTTTGGT TTCAAGCCAC CATGATCACC CCGTGGGCGC AGACATAGGG
TTTCGGCCGC TAATGGCGCA TGTGGTATTG TTCCAAGGTG ATAATTTAGA AGACATGACC
ACGTGGCAGC GTATCTAA
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| Protein sequence | MQTSPNRSVN HSFENVNHED SADYLVLDNI SVSFGHTEVV KSLSMRLNQG DIGCLLGFSG
CGKTTALRAI AGLEQPHQGR VVLNGKTLTD INQGKVTVQV MPAKRDMGMV FQDYALFSHL
TVSENIGFGL HRWSKADKAA RIQEMLELVE LTEHANKRIN QLSGGQQQRI ALARALAPKP
ELLLLDEPFS NLDMMLRESL AAKVRDILKR THTTAILVTH DQHEAFAIAD KIGVMHNGKL
AQWATPDELY HEPSSPFIAE FIGEGAMIDG VIEQGVIKTA LGDIKRYPEP IHATHKGFDY
DTYFSQGEVC EYDFPNGTKI KVLIRPDDIV HDDHSPQRAM VVERVFRGAN FLYRLRLDNG
EEVLSLVSSH HDHPVGADIG FRPLMAHVVL FQGDNLEDMT TWQRI
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