| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0866 |
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| Symbol | |
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| ID | 5204821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 1025338 |
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| End bp | 1026969 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640599087 |
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| Product | 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein |
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| Protein accession | YP_001279768 |
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| Protein GI | 148652675 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.998677 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000000177477 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCCAGACA AAAATGCCAC AACCTCCTCT GAACCACCCT CCGCCTTAAA CGCAACTGCT
GGCCAAAATG GCCAGGCCTT ATCGCCGCCT TGGTATTATA CTTTAGTGAT AAAGCTGTTA
AAGCCGCTGT ATAGGATAGC GCTGTGGCGT CGGCATAATA AAGCCAATAA GACAGGTTTG
CCTGTGGCTG ATTACAAAAG TGAAATTGAT GCTCGATATG GCCGCCGCTA CCCGCTGCCG
CCGCGTTTGG CCACTGCCAC AGAGGTCAGT GAGCGCACTT CGGCCTTTTA TAACACTCTG
ATTTGGTGTC ATGCCGTGTC ACTGGGCGAG ACCAATACCA TTGCGCCTAT GCTCAAGCAG
ATGCTCAAAC AAGGCGCAAG GCTATGGATT ACCAATACCA CACAGACTGG ATTTGCCCGC
ACTGAGGCCT TGTTTGCTGA AGCAATAGCT GCCGGTCAAG TGGTGCACAC TTTTGTGCCA
GTAGATGACA AGGCTGTGAT CCAAAAGTTT GTGGATAATG CCAAGCCAGA TTTGGCCATG
TTCGTTGAGA CTGAGCTGTG GGCCAATATT TTAGCGGTTC TTAAGCAATC TAATATACCG
TCAGTCTTAG TCAATGCCCG CTTATCCCAA AAATCTTATG ACAACTATGC CAAACATGCT
GCCGTTAGTA AGGGCATGGT CCACAACTTA ACTATGATTA TCGCGCAAGA TGCCGACTCC
GCTAAGCGCT TTCGTTATCT GGGCACTGAC GTTGTTAAAA TCCGCCGTGC CAACTCCTTA
AAATGGTCGA CCGGCTCCAT GCAGCCAAAA CCGCTAGATC AACTGCGCAG TGAATTTGCC
GCAAATACTC AGGCTCTACA GCGTCCGATT TGGGTAGCCG GCAGTACGCA TGATGGCGAG
GAGACTGCCG TGCTTAATGC TCATAAGCAG CTATTGACTC AGCCGCATAT GGCGAATGCT
TTACTTATCT TAGTGCCGCG CCATCCTGAG CGCTTTGATG CCGTGGCTGA GCTGATTGAA
CAGACTGGAC TTAACTACCG CAGGCGCAGT GAGCAGCAAC TGATTGATGC CGATACTCAA
GTGTATTTGG CTGATACCAT GGGGGAGCTA GGTGACTGTT ATGAGCTGTC TGATGTGGCC
TTGGTTGGTG GCTCTTTGGT CAATATCGGT GGTCATAATC CGATTGAAGC GGCCAGTCTG
GCTAAGCCTA TCATCATGGG GCCTTATACC CAGTCGTGTC ATGAATTGGT GAGTGAGTTG
AGCGCAGCTG GCGCCCTAGT GGTGGTAGAC GCCGCTGAAG GCCATGCCCA AAAGCGCAGT
AATAAACAAT CAGCGACTAA AGGCAGCGAT GGGGGGCAAA CACCGGCGCC GCAATCGACG
CTGCTGCAAG CTGTGCTTCA GTGGCTAGCC TATCCTGAGC AAGCACAGCG GGCCGGCCAG
CTAGGCGCGC AGCTGGTGGC CAAAAAAAGC GATGCCATGC AAAAGCAGCT AGCTATGATA
GAGAGCTTAT TGATTAAAAA GCAAATTGCC TTATCTGCTA AGCCAGATCC TAAACAAGAG
CCGCTGGACC TTGATTACTT TAAAGTACGT ACCCGCAGCG ATAGCAGCGA TATGGACAGT
GGCGAGCTAT GA
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| Protein sequence | MPDKNATTSS EPPSALNATA GQNGQALSPP WYYTLVIKLL KPLYRIALWR RHNKANKTGL
PVADYKSEID ARYGRRYPLP PRLATATEVS ERTSAFYNTL IWCHAVSLGE TNTIAPMLKQ
MLKQGARLWI TNTTQTGFAR TEALFAEAIA AGQVVHTFVP VDDKAVIQKF VDNAKPDLAM
FVETELWANI LAVLKQSNIP SVLVNARLSQ KSYDNYAKHA AVSKGMVHNL TMIIAQDADS
AKRFRYLGTD VVKIRRANSL KWSTGSMQPK PLDQLRSEFA ANTQALQRPI WVAGSTHDGE
ETAVLNAHKQ LLTQPHMANA LLILVPRHPE RFDAVAELIE QTGLNYRRRS EQQLIDADTQ
VYLADTMGEL GDCYELSDVA LVGGSLVNIG GHNPIEAASL AKPIIMGPYT QSCHELVSEL
SAAGALVVVD AAEGHAQKRS NKQSATKGSD GGQTPAPQST LLQAVLQWLA YPEQAQRAGQ
LGAQLVAKKS DAMQKQLAMI ESLLIKKQIA LSAKPDPKQE PLDLDYFKVR TRSDSSDMDS
GEL
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