| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0863 |
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| Symbol | |
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| ID | 5205212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 1021247 |
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| End bp | 1022023 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640599084 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001279765 |
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| Protein GI | 148652672 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.159909 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00000102018 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGATTG CATCACAAGC TTTTATCGTA ACCGGCGGCG CTTCAGGATT GGGTGCGGCC
ACCACACGTG AATTGGTCCA ACGCGGTGCC AAAGTGGTTG TTGCAGATCT AAATGCACAA
GCCGGTGAGG CACTGGTTAG CGAGCTTGGT GACAGTGTGC GCTTTGTGGC CTGTGATATT
ACAAAAAGTG AAGATGTGGA GCATGCCGTA CAGACTGCCG AAAAAGAGTT TGGCGGGCTA
GCTGGCAGTA TCAACTGTGC TGGTATCGCT ATCGTTCAAA AGCTGCTTGA TCGTGATAAT
AACCCTGCTG ACCTTGAGCA GTTTAACAAA GGGGTTCAGG TCAATTTGAT CGGTAGCTTT
AATGTGGCGC GCTTAGTGGC AGCAAGTATT GCCAAACGTG TGGCGGCCAG CGGCGGTCCT
AACAATGAAG ATCAAGGTAT TATTATCAAT ACCGCATCTA TCGCCGCCTT TGATGGCCAA
GTGGGACAAG GCAGCTATGC CTCCTCAAAA TCTGGGGTAG TGGGCTTGAC CCTGCCTTTG
GCACGTGAGC TGACTCGCCA TGGTATTCGT GTGATGACCA TTGCACCAGG TATTTTTGAA
ACCCCCATGA TGGCAGGTTT ACCAGAAAAG GCGCAAGAGC AGCTTAAAGC AAGCGTACCT
TATCCTAAAC GTTTGGGCAT GCCTGCAGAG TACGCCAATT TGGTCGCTCA TATTATTGAA
AATGCCTACC TTAATGGTGA GGTAATTCGT CTTGATGGTG CCATTCGTAT GACCTAA
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| Protein sequence | MKIASQAFIV TGGASGLGAA TTRELVQRGA KVVVADLNAQ AGEALVSELG DSVRFVACDI
TKSEDVEHAV QTAEKEFGGL AGSINCAGIA IVQKLLDRDN NPADLEQFNK GVQVNLIGSF
NVARLVAASI AKRVAASGGP NNEDQGIIIN TASIAAFDGQ VGQGSYASSK SGVVGLTLPL
ARELTRHGIR VMTIAPGIFE TPMMAGLPEK AQEQLKASVP YPKRLGMPAE YANLVAHIIE
NAYLNGEVIR LDGAIRMT
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