Gene PsycPRwf_0850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0850 
Symbol 
ID5206264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1005163 
End bp1006722 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content52% 
IMG OID640599071 
Producthistidine ammonia-lyase 
Protein accessionYP_001279752 
Protein GI148652659 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2986] Histidine ammonia-lyase 
TIGRFAM ID[TIGR01225] histidine ammonia-lyase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.03365 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTCCA CTCAAACCCT AAGACTCATC CCGCGCAAGC TTACCCTCGC TCAGCTGCGC 
CAGGTTTATG ATTCACCGGT ACAAGTCAGT CTTGATGACA GCGCATACAA AGACATAGAT
GCCTCGCATG ATTGCGTCAA AGAAATCATT GCCCGTGACA AGAGTGCTTA TGGTATCAAT
ACCGGCTTTG GACTGCTGGC GAAGACGCGT ATCAGTGATG ATCAATTGGG CCTATTGCAA
TACAACCTGA TTGTGTCGCA TTCTGTCGGC ACCGGTGAGC GTTTAGAGGA CGGTGTGGTA
CGTCTGATTA TGGTCATGAA AGTGGCCAGC CTTGCCCAAG GCTTCTCTGG CGTGCGCCGT
AAGGTGATTG ATGGCTTAAT CGGGCTGATC AATCACGATA TTATTCCGCA CATTCCTGCC
AAAGGCTCAG TGGGCGCGTC AGGCGATCTA GCCCCGTTAT CGCACATGAC TTTGACCCTG
CTTGGTCAAG GAACCTGTTA TATCAATGGC CAAGAGATGT CTGCCAAAGA CGCACTGGCA
CAAGCAGGTC TTGAGCCTGT CACGTTAGCA GCCAAAGAGG GCTTGGCCCT AATCAACGGC
ACCCAAGTAT CGACTGCGCT GACCTTACGT GGTTATTTCT TGGCCCGTGA TTTGGTCTCT
ACAGCCACTG TGGTCGGGGC ATTATCGGTT GATGCTGCGC GTGGTTCGGA CTCACCCTTT
GATGCCCGTA TCCATGAGTT ACGTGGCCAC CACGGCCAAA TCCAAGTTGC CAAGGCACAC
CGCCGATTAA TCGCTGGTAG TGAAATTCGT GCCTCACATA CCGAGAACGA TGACCGTGTA
CAAGACCCTT ACTGCCTACG CTGTCAACCA CAAGTCGTGG GTGCCTGCCT AGATATCATA
AATCAGGCCG GCCATACCTT GCTGATTGAG GCCAATGCGG TCACCGATAA CCCGCTAATC
TTTAGAGATG AGGACGGCCC AGTTGCCATT TCAGGCGGTA ACTTCCACGC CGAGCCAGTT
GCTTTTGCCG CAGATACTTT GGCACTTGCC ATTGCTGAAA TTGGCTCGAT GTCTGAGCGC
CGTGTGGCAC TACTAATCGA TGCCACCTTA AATGGCGGCC TGCCGCCCTT CTTGGTCGAT
AACCCAGGCG TCAACTCAGG CTTTATGATT GCGCATGTGA CCGCTGCTGC CTTGGCTTCA
GAAAATAAAT CTTTGGCCCA TCCTGCCAGC GTCGACAGCA TTCCGACCTC TGCCAACCAA
GAGGACCATG TGTCTATGGC CACCTTTGCT GGTCGCCGTC TATATGACAT GGCACAAAAT
ACCGCCACCA TTGTCGGTAT TGAGCTGTTG GCCGCTGGAC AAGGGATTGA TTTTCATAAA
GGACTGCAAA CCTCAGAGCT GTTGACCAAA GCACATGCCC TACTACGTGA AAAAGTAAGC
TTCTATGACA AAGACCGCTA TCTTGCCCCT GATATCGAAG CGGCCAAACA ACTGGTGTTG
TCTGCTGCGC TCAATGAGCA CTGGTCTGAG CTGCGAGCCG ACTGGTTTTT GCAAGACTAA
 
Protein sequence
MPSTQTLRLI PRKLTLAQLR QVYDSPVQVS LDDSAYKDID ASHDCVKEII ARDKSAYGIN 
TGFGLLAKTR ISDDQLGLLQ YNLIVSHSVG TGERLEDGVV RLIMVMKVAS LAQGFSGVRR
KVIDGLIGLI NHDIIPHIPA KGSVGASGDL APLSHMTLTL LGQGTCYING QEMSAKDALA
QAGLEPVTLA AKEGLALING TQVSTALTLR GYFLARDLVS TATVVGALSV DAARGSDSPF
DARIHELRGH HGQIQVAKAH RRLIAGSEIR ASHTENDDRV QDPYCLRCQP QVVGACLDII
NQAGHTLLIE ANAVTDNPLI FRDEDGPVAI SGGNFHAEPV AFAADTLALA IAEIGSMSER
RVALLIDATL NGGLPPFLVD NPGVNSGFMI AHVTAAALAS ENKSLAHPAS VDSIPTSANQ
EDHVSMATFA GRRLYDMAQN TATIVGIELL AAGQGIDFHK GLQTSELLTK AHALLREKVS
FYDKDRYLAP DIEAAKQLVL SAALNEHWSE LRADWFLQD