Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0850 |
Symbol | |
ID | 5206264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 1005163 |
End bp | 1006722 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640599071 |
Product | histidine ammonia-lyase |
Protein accession | YP_001279752 |
Protein GI | 148652659 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2986] Histidine ammonia-lyase |
TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.03365 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCTCCA CTCAAACCCT AAGACTCATC CCGCGCAAGC TTACCCTCGC TCAGCTGCGC CAGGTTTATG ATTCACCGGT ACAAGTCAGT CTTGATGACA GCGCATACAA AGACATAGAT GCCTCGCATG ATTGCGTCAA AGAAATCATT GCCCGTGACA AGAGTGCTTA TGGTATCAAT ACCGGCTTTG GACTGCTGGC GAAGACGCGT ATCAGTGATG ATCAATTGGG CCTATTGCAA TACAACCTGA TTGTGTCGCA TTCTGTCGGC ACCGGTGAGC GTTTAGAGGA CGGTGTGGTA CGTCTGATTA TGGTCATGAA AGTGGCCAGC CTTGCCCAAG GCTTCTCTGG CGTGCGCCGT AAGGTGATTG ATGGCTTAAT CGGGCTGATC AATCACGATA TTATTCCGCA CATTCCTGCC AAAGGCTCAG TGGGCGCGTC AGGCGATCTA GCCCCGTTAT CGCACATGAC TTTGACCCTG CTTGGTCAAG GAACCTGTTA TATCAATGGC CAAGAGATGT CTGCCAAAGA CGCACTGGCA CAAGCAGGTC TTGAGCCTGT CACGTTAGCA GCCAAAGAGG GCTTGGCCCT AATCAACGGC ACCCAAGTAT CGACTGCGCT GACCTTACGT GGTTATTTCT TGGCCCGTGA TTTGGTCTCT ACAGCCACTG TGGTCGGGGC ATTATCGGTT GATGCTGCGC GTGGTTCGGA CTCACCCTTT GATGCCCGTA TCCATGAGTT ACGTGGCCAC CACGGCCAAA TCCAAGTTGC CAAGGCACAC CGCCGATTAA TCGCTGGTAG TGAAATTCGT GCCTCACATA CCGAGAACGA TGACCGTGTA CAAGACCCTT ACTGCCTACG CTGTCAACCA CAAGTCGTGG GTGCCTGCCT AGATATCATA AATCAGGCCG GCCATACCTT GCTGATTGAG GCCAATGCGG TCACCGATAA CCCGCTAATC TTTAGAGATG AGGACGGCCC AGTTGCCATT TCAGGCGGTA ACTTCCACGC CGAGCCAGTT GCTTTTGCCG CAGATACTTT GGCACTTGCC ATTGCTGAAA TTGGCTCGAT GTCTGAGCGC CGTGTGGCAC TACTAATCGA TGCCACCTTA AATGGCGGCC TGCCGCCCTT CTTGGTCGAT AACCCAGGCG TCAACTCAGG CTTTATGATT GCGCATGTGA CCGCTGCTGC CTTGGCTTCA GAAAATAAAT CTTTGGCCCA TCCTGCCAGC GTCGACAGCA TTCCGACCTC TGCCAACCAA GAGGACCATG TGTCTATGGC CACCTTTGCT GGTCGCCGTC TATATGACAT GGCACAAAAT ACCGCCACCA TTGTCGGTAT TGAGCTGTTG GCCGCTGGAC AAGGGATTGA TTTTCATAAA GGACTGCAAA CCTCAGAGCT GTTGACCAAA GCACATGCCC TACTACGTGA AAAAGTAAGC TTCTATGACA AAGACCGCTA TCTTGCCCCT GATATCGAAG CGGCCAAACA ACTGGTGTTG TCTGCTGCGC TCAATGAGCA CTGGTCTGAG CTGCGAGCCG ACTGGTTTTT GCAAGACTAA
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Protein sequence | MPSTQTLRLI PRKLTLAQLR QVYDSPVQVS LDDSAYKDID ASHDCVKEII ARDKSAYGIN TGFGLLAKTR ISDDQLGLLQ YNLIVSHSVG TGERLEDGVV RLIMVMKVAS LAQGFSGVRR KVIDGLIGLI NHDIIPHIPA KGSVGASGDL APLSHMTLTL LGQGTCYING QEMSAKDALA QAGLEPVTLA AKEGLALING TQVSTALTLR GYFLARDLVS TATVVGALSV DAARGSDSPF DARIHELRGH HGQIQVAKAH RRLIAGSEIR ASHTENDDRV QDPYCLRCQP QVVGACLDII NQAGHTLLIE ANAVTDNPLI FRDEDGPVAI SGGNFHAEPV AFAADTLALA IAEIGSMSER RVALLIDATL NGGLPPFLVD NPGVNSGFMI AHVTAAALAS ENKSLAHPAS VDSIPTSANQ EDHVSMATFA GRRLYDMAQN TATIVGIELL AAGQGIDFHK GLQTSELLTK AHALLREKVS FYDKDRYLAP DIEAAKQLVL SAALNEHWSE LRADWFLQD
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