| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0843 |
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| Symbol | |
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| ID | 5206285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 998370 |
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| End bp | 999479 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640599064 |
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| Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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| Protein accession | YP_001279745 |
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| Protein GI | 148652652 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.269332 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGACTGCT TAAACTTCCC CGCTATTGCT AATATCGATA ATCCTCAATT GGCAGCTGAT
CTACAGCAGC TTCTGGATAA CAAAACCAAG CCAATTGGTG CACTGGGCCG GCTAGAAACG
CTAGCGCTAA AAATCGGGCT TATCCAAGGG ACAACGCAGC CAAAGATTGT TAGCCCGCAC
ATTCGAGTGT TCGCCGCTGA TCATGGGTTA ACCAAACATA GTACGTCGGC TTTCCCTAGT
GAGGTAACGG CGCAAATGGT GCTCAATTTC TTAAAAGGGG GCGCGGCAAT TAATGTGCTG
GCTCGTCAGC ATAATATTGA GCTCAAGGTG GTCGATGCGG GCGTGGCCAC TGACTTTGCT
GAATATGGGG TAGACCATCA TCCGCAGCTT TTGGATTACA AAGTGCGCCT GGGGAGCCGT
GATGCGCTCA CTGAACCGGC CATGAATAGT GAAGAATGTA TCGAAGCGCT TAAGGCAGGT
ATGCAGGTTG CCAAGTCTCT AAAAGGTAAT CTGTTTATTG CAGGTGAGAT GGGTATCGGT
AATACCTCAG CAGCAAGCTT ACTGCTCGCC AAGCTAGAAG ATATACCTAT TGCCCAGTGT
GTTGGCCGTG GTACGGGACT TGATGATGCT GGCTTACAGC ACAAAGTTGA CGTGCTAAGC
CAAGTATTGC AGCGTTATGA GCACGTGACC ACGCCACTTG AAGTGTTGGC GGCTGTGGGC
GGGCTTGAGA TTGCCATGAT GGCCGGCGCC TTTATCCAAG CGGCCAGTGA CCGACGTATT
TTATTAATAG ATGGTTTTAT TGCCAGCAGT GCGCTACTGG TCGCAGAGCG TTTGGTACCC
GGTGTGGCCC AATTTGCGAT ATTTGCCCAT CAGTCGGTAG AGCCTGGCCA CAGCAGGATG
TTGGCGGCGC TAGATGCTGA GCCCCTACTG GGCTTTGAGT TGCGATTGGG CGAGGGCAGT
GGTGCGGCGC TGGCGTATCC TTTATTGCAA TCAGCGTGCG CCATTATCAA TGAGATGGCA
AGCTTTAGTG ATGCGGGGAT TAGCACGCAA AGTGAGCCAG GTTCACAAGC CAATATAGCC
GCAGTTGTGG CCACTAGTGA TGGGCAATAA
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| Protein sequence | MDCLNFPAIA NIDNPQLAAD LQQLLDNKTK PIGALGRLET LALKIGLIQG TTQPKIVSPH
IRVFAADHGL TKHSTSAFPS EVTAQMVLNF LKGGAAINVL ARQHNIELKV VDAGVATDFA
EYGVDHHPQL LDYKVRLGSR DALTEPAMNS EECIEALKAG MQVAKSLKGN LFIAGEMGIG
NTSAASLLLA KLEDIPIAQC VGRGTGLDDA GLQHKVDVLS QVLQRYEHVT TPLEVLAAVG
GLEIAMMAGA FIQAASDRRI LLIDGFIASS ALLVAERLVP GVAQFAIFAH QSVEPGHSRM
LAALDAEPLL GFELRLGEGS GAALAYPLLQ SACAIINEMA SFSDAGISTQ SEPGSQANIA
AVVATSDGQ
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