Gene PsycPRwf_0838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0838 
Symbol 
ID5206172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp994586 
End bp995563 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content49% 
IMG OID640599059 
Productpeptide chain release factor 2 
Protein accessionYP_001279740 
Protein GI148652647 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.725639 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTCGC CAGAGCTTTG GAATGACCCA GAGCGCGCGA CCAAAATCAG CAAAGAAAAA 
AGCCAGCTTG ATGCAGTGAT TACTACCATT ACCGGTCTAG ACACTACTCT TGAAGATGCC
GCTGCCATGC TTGAGCTGGC GGTAGAGGCC GATGATGAAG GCTTGCTTGA AGAGGTGCAA
AATGAGCTTA ATGCTGCCCA AGCTTTGGTA GAGGACTTAG AGTTTAAGCG CATGTTCGAT
GGCGAGATGG ATGCCAATAA CTGCTTCGTT GATATTCAAT CAGGCAGTGG GGGTACCGAG
GCGCAAGACT GGGCAGAGAT GCTGCTACGC ATGTATACCC GTTGGTGTGA GTCACATGGG
TTTAAGGTTG AGATTATTGA GGTGTCAGCG GGTAGTGTGG CTGGCGTGAA ATCAGCCTCA
TTTAAAGTCA GCGGTGATTA TGCCTTTGGC TGGCTGCGAA CCGAGACAGG CGTACATCGC
TTGGTGCGCA AATCACCCTT TGATAGCAAT AATGGCCGTC ATACCTCGTT TGCTGCGGTG
TTTGTGTCGC CTGAAATTGA TGATGATTTT GAGATTGATA TTAATCCGGC TGATTTACGT
ATTGATACCT ATCGCTCAAG TGGGGCAGGT GGTCAACACG TCAACACCAC CGACTCTGCG
GTGCGTATTA CCCACGTACC GACGGGTACC GTGGTGCAGT GTCAAAATGA GCGCAGCCAA
CACGGCAACA AAGCCACGGC CATGAAGATG CTACGCGCTA AATTGTATGA GCTTGAGATG
CAAAAGCGTA TGGAGCAGCA GCAAGCCGTT GAAGACAATA AATCTGATGT GGGCTGGGGC
AGTCAAATTC GCTCGTATGT GCTTGATGAC TCTCGTATTA AAGATTTACG TACTGGTGTT
GAGACCTTTA ATACCGGTGC AGTATTAGAT GGTGATTTGG ATCAATTTAT TGAGGCAAGT
CTTAAAGCAG GATTATAA
 
Protein sequence
MASPELWNDP ERATKISKEK SQLDAVITTI TGLDTTLEDA AAMLELAVEA DDEGLLEEVQ 
NELNAAQALV EDLEFKRMFD GEMDANNCFV DIQSGSGGTE AQDWAEMLLR MYTRWCESHG
FKVEIIEVSA GSVAGVKSAS FKVSGDYAFG WLRTETGVHR LVRKSPFDSN NGRHTSFAAV
FVSPEIDDDF EIDINPADLR IDTYRSSGAG GQHVNTTDSA VRITHVPTGT VVQCQNERSQ
HGNKATAMKM LRAKLYELEM QKRMEQQQAV EDNKSDVGWG SQIRSYVLDD SRIKDLRTGV
ETFNTGAVLD GDLDQFIEAS LKAGL