| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0802 |
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| Symbol | |
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| ID | 5204715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 955013 |
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| End bp | 956962 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640599023 |
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| Product | cytochrome c-type biogenesis protein CcmF |
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| Protein accession | YP_001279704 |
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| Protein GI | 148652611 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1138] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.73075 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAATTA CTGAGCTAGG GTATTTTGCT TTAGTGGCAT CAATGGTATT GGCGTTACTG
CAAGTGGTGC TACCAACTTT TGGCATTGTC CGGCAGCAGC CTCATTTGCA GCGTTTGGCT
CCAAGCTTAG CTTGGGCACA GTTCGTGGCA GTAGGATTGT CCTTTTTGGC ACTGATGGCT
GGGTTTTATT ATAACGACTT TACTTTAGTG TATGTCGCCC AGCACTCCAA CTCTTTGCTG
CCTTGGTACT ATAAGCTATC TGCCACTTGG GGTGGTCACG AAGGGTCTTT ACTATTGTGG
GTAACCATTT TGGCTGGCTG GTCATCCATG GTGGCGTGGT TTAGCCGCGG CTTACCACTC
AATATGCGTG CTCGCGTTTT AGTCATCTTA GCGGCTGTAC AGTTGATGAT GTTGGCCATG
CTGATTTTTA CCTCATCACC TTTTGATCGC ACCTTACCCA ATGTCCCTGT GGATGGGGCG
GATCTAACCC CCTTACTACA AGACCCCGGC TTAATTTTCC ATCCACCTAT GCTATATATG
GGCTATGTGG GAATGGCAGT GCCGTTTGCA TTTTGTATGG CGGCGCTTTG GGCCGGTCGT
TTGGATGCGG TATGGACGCG TTGGTCTCGC CCGTGGGCGC TAGCGGCATG GGGCTTTTTG
ACCTTGGGTA TCGCTTTGGG CTCTTGGTGG GCTTATTATG AGCTTGGTTG GGGCGGTTGG
TGGTTCTGGG ATCCGGTTGA GAATGCATCC TTGATGCCTT GGCTGGCATG TACGGCCTTA
ATTCACTCGT TGGCGGTAAC TGAAAAGCGT GGGGTGTTTA AAGCGTGGAC CATTATGCTG
TCTATCTTCG CCTTTGCGCT AAGCTTACTG GGAACCTTCT TGGTGCGCTC AGGGGTGATT
ACCTCTGTGC ATTCTTTTGC TGCTGATCCC ACGCGTGGTT TGGCCATTTT AGCCATCTTA
GGGGTGGTGA TTGGCTCAGG GTTATTTGTG TTCGCTGTGC GCGGATGGCG CTTGACCGTT
GAGAGTCATT ATGGTCTAAA ATCACGTGAG ACCTTATTAG TAATCAACAA CATAGTAATA
TTAGTGGCCA CCTTAGTGGT TCTACTAGGA ACCTTGTATC CCATCATTGC TGACTCCTTT
AATTTGGGTC AGGTATCGGT GGGCCCTCCT TACTTTAACG CCTTGTTCGT GCCTTTGGCG
TGGCTGATTT TATTGACTAT GGGTATGGGC TCAAACTTGC GCTGGAAGCA AGACAAACGC
CCGCTGCTGG GTGCTGCCAC CACCATTTTG GTAAGCAGTG CATTGTTAGC CGGTATTATT
ACCTACCTCA TTACCAAAAG TCTTAATGTC CAAATTATTA TCACCGGTTT ATTGTGTTTG
TGGGTGCTGG GCTGGATGTT GTATGACATC AAAGAAAAAA CCCGCAATGC ACCAAGCCTT
GGGCGAGGTC TAAAGCGTTT AAAAGCTCAT TATTGGGGCA TGCAAATTGC GCATGTGGGC
GTATTGATTG TCGCTTTGGG TATTGGTGTG ACCACCGCGC TGAGTGTCGA AAAAGATGTG
GCAATGACGG TGGGCGATAC TGTGGATGTC AATGATTACC ACTTTACTTT AGTTGACTTT
GAACAAGTGC GCGGCAAAAA CTATGATGCC ACTCAAGCGG AGATTAAGGT CGAAAAAGAC
GGTAAGTTTG TGACCACGTT ATACCCACAA AAACGTGATT ATGTGGTCAG TAGCATGCCT
ATGACCGAAG CGGGTATCCA AACCACTATG CTACGAGATG TCTATGTGGC CCTAGGCGAG
CCGATTAATG TCAATGAGCC TGAGGGTAAT TGGGCAGTGC GTGTGTATGT TAAGCCCATG
ATTGCATGGC TATGGCTTGG TGCCATAGTG ATGGCGTTAG GCGGCATTAT CAGTATGCTA
GATCGCCGTT ATCGCCTAAA AAAATCTTAA
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| Protein sequence | MVITELGYFA LVASMVLALL QVVLPTFGIV RQQPHLQRLA PSLAWAQFVA VGLSFLALMA
GFYYNDFTLV YVAQHSNSLL PWYYKLSATW GGHEGSLLLW VTILAGWSSM VAWFSRGLPL
NMRARVLVIL AAVQLMMLAM LIFTSSPFDR TLPNVPVDGA DLTPLLQDPG LIFHPPMLYM
GYVGMAVPFA FCMAALWAGR LDAVWTRWSR PWALAAWGFL TLGIALGSWW AYYELGWGGW
WFWDPVENAS LMPWLACTAL IHSLAVTEKR GVFKAWTIML SIFAFALSLL GTFLVRSGVI
TSVHSFAADP TRGLAILAIL GVVIGSGLFV FAVRGWRLTV ESHYGLKSRE TLLVINNIVI
LVATLVVLLG TLYPIIADSF NLGQVSVGPP YFNALFVPLA WLILLTMGMG SNLRWKQDKR
PLLGAATTIL VSSALLAGII TYLITKSLNV QIIITGLLCL WVLGWMLYDI KEKTRNAPSL
GRGLKRLKAH YWGMQIAHVG VLIVALGIGV TTALSVEKDV AMTVGDTVDV NDYHFTLVDF
EQVRGKNYDA TQAEIKVEKD GKFVTTLYPQ KRDYVVSSMP MTEAGIQTTM LRDVYVALGE
PINVNEPEGN WAVRVYVKPM IAWLWLGAIV MALGGIISML DRRYRLKKS
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