Gene PsycPRwf_0796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0796 
Symbol 
ID5205405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp948044 
End bp948655 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content49% 
IMG OID640599017 
Productubiquinol-cytochrome c reductase, iron-sulfur subunit 
Protein accessionYP_001279698 
Protein GI148652605 
COG category[C] Energy production and conversion 
COG ID[COG0723] Rieske Fe-S protein 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000156865 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTTA TCTGGAGGAA GTTTTTAATG AGCCATGCCG AAGGCGTCAA CATAAAACGC 
CGTAGAGTTC TGATCGCTTC AACTGCCGCT ATTGGCGCAG TAGGAGTTGC ATCGGTGGCC
ACGCCATTTG TTCGCTCTTG GTATCCAAGT GCGAAGGCTG AAGCTGCAGG TGCTGCCGTT
ACCCAAGACA TTAGTGCCAT TGAAGATGGT CAAATGATTG TGGTGAAATA TCGTGGTAAA
CCAATCTTCG TCGTCAAGCG TACTCCTGAG ATGTTGGACA ACTTAACTAA AGTAACGCCT
TTATTAAGTG ACCCACAATC TGAGGCTTCA GTGCAACCTG AATACGCCAA AAACGAAACC
CGCTCACGTG AGCCTACTGT CTTGGTAGTA GAAGGTGTTT GTACCCATTT GGGCTGCGCA
CCAAACTATC GCCCAGAAGT AGGTGCAGCT GACTTAGGTG GTGGTGATTG GTTCGGTGGT
TTCTTCTGCC CATGCCATGG TTCAAAATAC GACCTAGCTG GACGCGTGTA CAGCGGTGTA
CCTGCCCCAC TAAACCTACC AATACCTGAC TACAGTGTTG ATGGTCCTAT CTTAACTATT
GGGGAGGCAT GA
 
Protein sequence
MTFIWRKFLM SHAEGVNIKR RRVLIASTAA IGAVGVASVA TPFVRSWYPS AKAEAAGAAV 
TQDISAIEDG QMIVVKYRGK PIFVVKRTPE MLDNLTKVTP LLSDPQSEAS VQPEYAKNET
RSREPTVLVV EGVCTHLGCA PNYRPEVGAA DLGGGDWFGG FFCPCHGSKY DLAGRVYSGV
PAPLNLPIPD YSVDGPILTI GEA