Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0794 |
Symbol | |
ID | 5205403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 946096 |
End bp | 946815 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640599015 |
Product | cytochrome c1 |
Protein accession | YP_001279696 |
Protein GI | 148652603 |
COG category | [C] Energy production and conversion |
COG ID | [COG2857] Cytochrome c1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0108816 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGCTT TAACTAAATC ATTGACCGGC TTCGGATTTG GTGTTGCTTT AACACTAGCC GCCACTACCT CTGCGCAAGC AGCAGGTGGT GAAGGCTGCG GCACCTTTAC CAACGCAGAT GGTGTGGAAG AGCATTTAGC ATGTAGCACA GCCCCTATCG ACTTTGCTAA CAAAGGTTCT TTGCAGCGTG GTGCTACCAT GTTCATGAAC TACTGTGCAG GCTGTCATAC GGCTAAATAC GTGCGTCATT CACGTATTGC TCAAGACTTA GAGATTCCAC CTGAATTGGT TGAGAAGTAC TTATTGGTTA CTTCAGATCA AATCGGTGAT CAAATTGACA ACGGTATTGA CCCTGAAATT CAAGCCTCTT GGTTTGGCGC GCCACCACCT GATTTATCTT TAGAGACACG TCTACGTGGT GATGACTGGG TATACACATA CCTACTTAGC TTCTATGAAG ATCCTAGCCG TCCTTGGGGC GCGAACAACC TAGTGCTGCA CAATGCTGCT ATGCCTCACG TTTTGATGAA CTTACAAAAC CAGTTGGGCG AAGAAGAATA CCGCAGCCGT GTGGGTGACC TCGTCAACTT TATGGCTTGG ATGGCAGAGC CTGTTCGTGA AGACCGTCAA CGCTATGGCT TCTTCGTGAT TATCTTCTTG CTAATTTTAT TAATCCCAGT TTACTTACTA AATAAAGAGT TCTGGAAAGA CGTAAAATAG
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Protein sequence | MSALTKSLTG FGFGVALTLA ATTSAQAAGG EGCGTFTNAD GVEEHLACST APIDFANKGS LQRGATMFMN YCAGCHTAKY VRHSRIAQDL EIPPELVEKY LLVTSDQIGD QIDNGIDPEI QASWFGAPPP DLSLETRLRG DDWVYTYLLS FYEDPSRPWG ANNLVLHNAA MPHVLMNLQN QLGEEEYRSR VGDLVNFMAW MAEPVREDRQ RYGFFVIIFL LILLIPVYLL NKEFWKDVK
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