Gene PsycPRwf_0794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0794 
Symbol 
ID5205403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp946096 
End bp946815 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content46% 
IMG OID640599015 
Productcytochrome c1 
Protein accessionYP_001279696 
Protein GI148652603 
COG category[C] Energy production and conversion 
COG ID[COG2857] Cytochrome c1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0108816 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCTT TAACTAAATC ATTGACCGGC TTCGGATTTG GTGTTGCTTT AACACTAGCC 
GCCACTACCT CTGCGCAAGC AGCAGGTGGT GAAGGCTGCG GCACCTTTAC CAACGCAGAT
GGTGTGGAAG AGCATTTAGC ATGTAGCACA GCCCCTATCG ACTTTGCTAA CAAAGGTTCT
TTGCAGCGTG GTGCTACCAT GTTCATGAAC TACTGTGCAG GCTGTCATAC GGCTAAATAC
GTGCGTCATT CACGTATTGC TCAAGACTTA GAGATTCCAC CTGAATTGGT TGAGAAGTAC
TTATTGGTTA CTTCAGATCA AATCGGTGAT CAAATTGACA ACGGTATTGA CCCTGAAATT
CAAGCCTCTT GGTTTGGCGC GCCACCACCT GATTTATCTT TAGAGACACG TCTACGTGGT
GATGACTGGG TATACACATA CCTACTTAGC TTCTATGAAG ATCCTAGCCG TCCTTGGGGC
GCGAACAACC TAGTGCTGCA CAATGCTGCT ATGCCTCACG TTTTGATGAA CTTACAAAAC
CAGTTGGGCG AAGAAGAATA CCGCAGCCGT GTGGGTGACC TCGTCAACTT TATGGCTTGG
ATGGCAGAGC CTGTTCGTGA AGACCGTCAA CGCTATGGCT TCTTCGTGAT TATCTTCTTG
CTAATTTTAT TAATCCCAGT TTACTTACTA AATAAAGAGT TCTGGAAAGA CGTAAAATAG
 
Protein sequence
MSALTKSLTG FGFGVALTLA ATTSAQAAGG EGCGTFTNAD GVEEHLACST APIDFANKGS 
LQRGATMFMN YCAGCHTAKY VRHSRIAQDL EIPPELVEKY LLVTSDQIGD QIDNGIDPEI
QASWFGAPPP DLSLETRLRG DDWVYTYLLS FYEDPSRPWG ANNLVLHNAA MPHVLMNLQN
QLGEEEYRSR VGDLVNFMAW MAEPVREDRQ RYGFFVIIFL LILLIPVYLL NKEFWKDVK