Gene PsycPRwf_0755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0755 
Symbol 
ID5205742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp900126 
End bp901373 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content49% 
IMG OID640598974 
Producttryptophan synthase subunit beta 
Protein accessionYP_001279657 
Protein GI148652564 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0133] Tryptophan synthase beta chain 
TIGRFAM ID[TIGR00263] tryptophan synthase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000954006 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.692308 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACAT TTGATAATAT TCCGCACAAT GATGAGATTG ACGATATCCA AGATTTTAAT 
CAGTATCCAG ATGCCAGTGG TCACTTTGGT ATCCATGGCG GCCGCTTCGT ATCAGAGACT
CTAATGGCGG CATTAGAGGA GCTTGAGACC TTATATTATC AAGTCAAACA AGACCCTGCA
TTTTGGCAGG AGTACCACAA TGACTTAGTC AATTATGTGG GTCGTCCAAC GCCGCTTTAT
CATGCCAAGC GTTTGAGTGA TGAGATTGGC GGCGCGCAGA TTTATTTTAA GCGTGAAGAT
TTAAACCACA CCGGCGCGCA CAAAGTAAAC AACACCATCG GTCAGGCGCT ACTGGCTAAG
ATGAGCGGCA AAAAACGTAT TATTGCCGAG ACCGGTGCGG GTCAACATGG CGTGGCAACA
GCGACGATTG CAGCACGGCT AGGACTTGAG TGTATTATTT ATATGGGCGC AGATGACGTC
GAGCGTCAAA AAATGAACGT GTATCGTATG CGTCTGCTTG GGGCTAAAGT GGTGGCGGTT
GAGTCTGGTT CACGGACGCT AAAAGATGCG ATGAACGAGG CGATGCGTGA TTGGGTGACC
AATGTTGATA CCACCTATTA TATTATTGGT ACGGTCGCAG GGCCGCACCC TTATCCGTTA
TTGGTGCGTG ATTTTCAGGC CATTATTGGT AAAGAGGCGC GTCTGCAGCA TCTAGAGAAA
ACCGGCAAAC TGCCTGATGC ACTTGTCGCC TGTGTGGGCG GCGGATCCAA TGCCATTGGT
CTGTTCTATG AGTTCTTAAA TGATACCGAT GTCAAAATGT ATGGCGTAGA GGCGACAGGT
GATGGTATCG AAACCGGCCG TCACTCAGCG CCGCTAGCGG CAGGCCGCGT CGGGGTGTTG
CATGGCAATC GCACTTATCT GATGGCCGAT GATGATGGTC AGATCCTAGA GACGCATTCA
ATCTCAGCAG GTCTTGATTA TCCGGGCGTG GGCCCTGAGC ACAGCTTCTT AAAAGATGTG
AAGCGGGTAG AGTATGTGGG CTGTACTGAT AAAGAGGCGC TACATGGTTT TCATGAAGTG
ACCCGAAAAG AAGGTATTAT TCCGGCGCTT GAGTCCTCGC ACGCGGTCGC TTATGCCTTA
CAGCTTGCCA AAACCATGAG TCCTGAGCAG AGCATCATCG TCAATATGTC AGGCCGTGGT
GATAAGGATT TGCACTCGGT AATGAAGGCT GAAGGCATTG AGCTTTAA
 
Protein sequence
MTTFDNIPHN DEIDDIQDFN QYPDASGHFG IHGGRFVSET LMAALEELET LYYQVKQDPA 
FWQEYHNDLV NYVGRPTPLY HAKRLSDEIG GAQIYFKRED LNHTGAHKVN NTIGQALLAK
MSGKKRIIAE TGAGQHGVAT ATIAARLGLE CIIYMGADDV ERQKMNVYRM RLLGAKVVAV
ESGSRTLKDA MNEAMRDWVT NVDTTYYIIG TVAGPHPYPL LVRDFQAIIG KEARLQHLEK
TGKLPDALVA CVGGGSNAIG LFYEFLNDTD VKMYGVEATG DGIETGRHSA PLAAGRVGVL
HGNRTYLMAD DDGQILETHS ISAGLDYPGV GPEHSFLKDV KRVEYVGCTD KEALHGFHEV
TRKEGIIPAL ESSHAVAYAL QLAKTMSPEQ SIIVNMSGRG DKDLHSVMKA EGIEL