| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0746 |
|---|
| Symbol | |
|---|
| ID | 5206154 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 889601 |
|---|
| End bp | 890377 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640598965 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001279648 |
|---|
| Protein GI | 148652555 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.260644 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGAAC TTGACCAGTT AACCGTGAAG CGTGGCGCAC TTACCGTGGC CCAATCTATC
AATGCCCAGT TTCATCCGGG CAAAATATAC ACGCTGCTCG GAGCAAATGG TGCAGGCAAA
TCAAGCTTAT TAAAGGCAAT CTTTGGTGAG TTAGCGTTTT CAGGTAACAT TCGTTATCAC
AGAACCACAC AAAGTAAAGC CAACCTGATG TCTTGGCGAA AGCCTATTGC TTATATGCCC
CAAGACAGCC ATACCGATGC GGAGCTTAAC ACGCTTGAGG TAGTGCTATT GGGGCGTATG
GATGCACTGG GCCGACATAT TAGTGATGAG CTGATGCAAG AGGCCATTGA GCTGATGGCA
CAGTTGAATA TCGCCGAGCT GGCACATCGG CCGATCCGTG CGCTAAGCGG GGGACAGCGT
CAGCTTGCCA TGTTTGCTCA AGCCTTATTA AGTTGTCCCC AAATCTTGTT GCTTGATGAG
CCTGTTTCAG CACTAGACAT GGCGCATCAA ATCAATCTAT TACATAAGGT GAGTCACTAT
ACTCAGCAAA ATCAGCTTAT TTGCTTGATG GTATTACATG ATTTAAGCCT TGCCGCTCAA
TTCTCTGATG AATTGTTGCT GTTATCTGAG GGTCATATTC AGGCTCAAGG CGCACCTCAA
GATGTGCTAC AACCGCACAT TTTACGCCAA GTATATCAAG TAGATATCGA GATTCTAACC
AGCTCTCAAG GGCTGCCCGT CGTCTATCCT TACCGAAAAA ATATGCAAAG TAAGTGA
|
|---|
| Protein sequence | MLELDQLTVK RGALTVAQSI NAQFHPGKIY TLLGANGAGK SSLLKAIFGE LAFSGNIRYH
RTTQSKANLM SWRKPIAYMP QDSHTDAELN TLEVVLLGRM DALGRHISDE LMQEAIELMA
QLNIAELAHR PIRALSGGQR QLAMFAQALL SCPQILLLDE PVSALDMAHQ INLLHKVSHY
TQQNQLICLM VLHDLSLAAQ FSDELLLLSE GHIQAQGAPQ DVLQPHILRQ VYQVDIEILT
SSQGLPVVYP YRKNMQSK
|
|---|
| |