| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0741 |
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| Symbol | |
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| ID | 5205176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 882443 |
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| End bp | 883759 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640598960 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001279643 |
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| Protein GI | 148652550 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00895] benzoate transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0470116 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCAA TCGTATTAAA GGATTTTATT GATAGTCGAG CGCTTGGCAA TCGTCAGAAG
TCTATTATAG CCCTATGTAT GGCCCTAATG ATTTTGGACG GTTATGATAT ACAAGCGATG
GCTTATGCCG CCCCTCTAAT TATTAGTGAT TGGCAAATTG ACAAAACCAT GTTGGGTGTG
GTGTTCAGCT CAAGCTTGGT TGGTTTGTTC TTTGGTTCAT TGTTGATTAG TAATTTGTCA
GATCGCTTTG GGCGTCGTAT CATTTTGCTA ATCTCAACCT TACTGTTTTC GATATTTATG
TTAGTCACGC CAATGGCTCA TAACCTAGAG CAATTGGCGA TTTTGCGTTT TGTGACGGGT
ATTTTTTTGG GCGGTATTAT GCCCAATGCT ATGGCATATT GTGCTGAGAT TGTGCCAAGC
AAATACCGTG TGTTTACAAT GATTATGATC TCATCAGGCT TTACCATTGG TGCAATGCTA
GGTGGTTTTG TGGCAACGTG GTTAAAGGCT TATGGGTGGC AAGCAATCTT TTATTTTGGT
GGTATCGTCC CCTTAATTTT GTTTGTGATC ATGTTTCTGG CCTTGCCCGA GTCGTTACAA
TTCTTGGCCT CAAAGCCCAA TAATGAGAGC AAGATAAAGT CAATATTACA GCGCTTTTAT
CCCAGTGCTA CTATATCTAA TGACACCACT ATCATATTAC CTAAGAATGA AACGGTTAAA
GCCTCACCAA TAGAATTATT TAAAGAAAAT CGCAGCTTTT TTACCATCAC TATCTGGATT
GCCAGTATGA TGAACTTGAT GAGCTTGTAC TTTTTATCAA GTTGGCTACC GACACTGGGT
ATGGAGGCAG GACTTACCAC CACTCAAGCG TTAATGATAG GCTCAACGTT ACAATTTGGC
GGTACAGTGG GTAGTTTATT GATGGGAACA CGCATCAATA AGCTGGGCTT TTATAAAGTA
TTAATTCCCA TCTTTATAGT GGCTGCTCTT AGTGTTGCAA TGATTGGCTT TAGTGCAGGC
AGTATTGTAG TGCTATTTAT TGTGGTGTTT ATTGCAGGGT TCACGGTTGT CGGTGGACAA
CCTACACTTA ATGCGTTGTC TGCTGAACGC TATCCTACCT TGCTACGTAC AACAGGTGTT
GGCTGGAGCT TGGGAATTGG TAGAATTGGA TCGATGATAG GCCCGGTTAT TGGCGGCTTG
CTCTCAAAAT CTTTAACATT AAGTACACTG TTTTTATTTG CAGCAGTGCC TTCAATTGTG
GTAGTTATAA TGATGATAAT GCAAGCAAGA CACCCTGGTA GTAAGTCTGA GCTTTAG
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| Protein sequence | MKSIVLKDFI DSRALGNRQK SIIALCMALM ILDGYDIQAM AYAAPLIISD WQIDKTMLGV
VFSSSLVGLF FGSLLISNLS DRFGRRIILL ISTLLFSIFM LVTPMAHNLE QLAILRFVTG
IFLGGIMPNA MAYCAEIVPS KYRVFTMIMI SSGFTIGAML GGFVATWLKA YGWQAIFYFG
GIVPLILFVI MFLALPESLQ FLASKPNNES KIKSILQRFY PSATISNDTT IILPKNETVK
ASPIELFKEN RSFFTITIWI ASMMNLMSLY FLSSWLPTLG MEAGLTTTQA LMIGSTLQFG
GTVGSLLMGT RINKLGFYKV LIPIFIVAAL SVAMIGFSAG SIVVLFIVVF IAGFTVVGGQ
PTLNALSAER YPTLLRTTGV GWSLGIGRIG SMIGPVIGGL LSKSLTLSTL FLFAAVPSIV
VVIMMIMQAR HPGSKSEL
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