Gene PsycPRwf_0731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0731 
Symbol 
ID5205159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp873596 
End bp874450 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content44% 
IMG OID640598951 
Productintegrase catalytic subunit 
Protein accessionYP_001279634 
Protein GI148652541 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.100278 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000433601 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCAAGAGA ATCGATTGAA ATACTGCATA CAACGTATGG CGACCGTATT TGAAGTCAGC 
CTATCAGGCT ACTATGACTG GCTAAAGCGA GGCATGAGCA AGCGAAAACA GCACCACAAT
CGCTGTGAGT TACTGGTCAA ATCCGCTCAT ATGGATACAC AGCAAAGCTA TGGGCATGAA
CGCTTGCATC AGCATTTAAC CAGCCAAGGA CACGACATCA GCCTGTACAT GGTTCGGCAA
ATCAAGCAAG AACATGGTAT TTACTGCAAA CGCCACAAGC GATCTAAGGT GACTACTGAC
TCAAATCATA ATAAGCCTGT GTATCCAAAC TTGTTAGAAC AGCAGTTTGA CGTGGCAGCA
CCCAATATCG CTTGGGTTAG CGATATTACC TATATTTGGA CCAATGAAGG CTGGGTGTAC
TTGGCAGCGT TCAAAGACTT GTACAGCAAA GAGATTGTGG GATATGCTCT AAATAAGCGT
ATGACCGCTG ATTTGGTTTG TGAGGCTTTA AACAATGCCA TTAAGTACAA ACGCCCTGCT
CGGGGCTTAA TCGTGCATTC TGACAGGGGT AGTCAGTATT GTAGCCATCA ATACCGCCAA
ATCATCGACA AGTATGGTTT TGCTGGCTCT ATGAGCCGAA AAGGCAATTG CTACGATAAC
GCCCCGATTG AAAGCTTCTG GGGTCAGTTA AAAAACGAGC TGATTTATCA CAAAGTCTAT
GAGACTCGTG ATGAAGCCAT TAAGGATGTG GTTAGATATA TTGAGATTTT TTACAACCGT
CAACGAATAC AAAAAGGGTT AGGATTTAAG TCACCTACTC AAGTATTCCA AGACTTTTAC
CGTCAGGCTG CCTGA
 
Protein sequence
MQENRLKYCI QRMATVFEVS LSGYYDWLKR GMSKRKQHHN RCELLVKSAH MDTQQSYGHE 
RLHQHLTSQG HDISLYMVRQ IKQEHGIYCK RHKRSKVTTD SNHNKPVYPN LLEQQFDVAA
PNIAWVSDIT YIWTNEGWVY LAAFKDLYSK EIVGYALNKR MTADLVCEAL NNAIKYKRPA
RGLIVHSDRG SQYCSHQYRQ IIDKYGFAGS MSRKGNCYDN APIESFWGQL KNELIYHKVY
ETRDEAIKDV VRYIEIFYNR QRIQKGLGFK SPTQVFQDFY RQAA