Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0728 |
Symbol | |
ID | 5205156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 870006 |
End bp | 872429 |
Gene Length | 2424 bp |
Protein Length | 807 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640598948 |
Product | hypothetical protein |
Protein accession | YP_001279631 |
Protein GI | 148652538 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000987924 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000000933008 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGAAAGATT CGGCCGAAGA GATGGTTATT GTGGATTTAG CTGACTTACA GAAAGCTCTA GAGCTTGCTA CATCAGAGCT TGATACGGAG CTTGTTGAGG CTCTAAATGA GTTAATTATT GATCTGCATC GTGCCGTAAC TTCTGAGATT AGTCTTAAAG AAGTCGATTT GAGTCGGTTA GCAGAAATTA ATTTTTTTGA TTACCAAATA TCACGAAAGT GGTTTAAAGG TAAATCACTA GAGCATCAGC TTATTGCAAT TTTGATCGAT GCTACTAGCA AGGACACTAA TAAATCTTTA TGGATTGCAG TCGTTCTGTA TATCAGTTTG GTACTAAAAA TTCATGGTAA AGACAAAGAG TCGGAGCGAC TGATTAAACG CTTTAAAACA GCCTACTTTT ATAAGACACG TAACTACCAG TGGATTTGGA ATGAGCTCCC AAACCTCGAT AAAACTGAAG AAGTGACACA CGCACTCATC TTGAATACCT TCGCATTAAT GCTTGACAAG TTAAATGAAA ATAAAGCGGA AGCTGAGGCA AATAGGGTTA GGGGAATAGT TGAAACAGAA GCAACAACAA AGTTTAGAGA TAAAAAGCTC AATCAAATAA GCGAGATTAA GAAATACATA GAAGCGGCGT ATTACCCACA CCGTAAAAGC CCAAAAAAGG CACCAAAGCC AAAGACGAAA TCTAAAAGCA CTAGCACTAA CAAAAACGAA GGAGAGGGGC GAACTAAAAA GCTCAGACCG CCTACACTCT CAGATAATGT CGAAAGAACA CCGGCTGCTA CGTCCTTTAA TGACATAGAC AGCCCGATTA GTAAGAGAGA TTGGGCTGTA TTTGATGCAT TCTATGTACC AGACAGTACT ATTGATTATG CTACTAAAGA AGAAGCTTTT GATGTCATGC CACCTAGGGT TGAGATTTAC TGGCCAAAAA CTCAAACACA AAACCGAGGA AGGAGAAGTT TTGAGTTAGA CGCAGTCGAT TTTAGTGTCA AGCAGCAACA TATCAGCTTA AAAGAACTAG AGTTGCCATC AGACGTAAAT ATGCTTTCAA CTACCTCTTG TAAACTTATA TTTAATCAGT TGTCATCAGA TTGGAAGAGT AATGATAAAA AAATGAGTCT GATTGCGGCA ATCTTACTAC TTTCAATGAT TACAGCATGT CCAGTGGCTA GCTTGATTGA AAAAGGCTTT ATTGAAAAGT CAGGGTTATT CTATATAGGT AAACGTAAAG GTTATCTACA GTCGAAACTT GGGGTAACTA CGATAGAGGA ATACAGTGAC AATAATTTAA ATAGCACAGA CCTAATTAAA ATACCTTTGC CCGTTAGTTT GCTAAAAGCA GCCATAGAAG CCTCTAAAAG CCAAATTAAA ATAGAAGATA TTGAAGCCTA TGTAAAGAGG CTAAAAGAAA GCCTTAATAT AGTGTACACA ACTATTAGTA GGATTGAATC AGCGCTACAT TTTATTTTGA GGAGATTTGT CGAAGGTAGT AACTCACATA TCGCTGATAT TCTTTGTCGG ATCGATGCAA GTCAAGCAGC TGCTAAATAT TATAGTAGCC ATTCTCATCA AGAGTTAATA GGGCACTATA AAAAAGCATT GCAGTTTATG AATATACATA ACTGTTTTGA CCTTGATTAT ATTGACAGCC ATTCAGAAGA TTTTTTGACA GGATCAGGGT TTGCCTTGAA ATTAGAGAGT GTTAGGCAGT TTTTTCAACG TCTCAGGAGT TGGGTAATAG AGAGTCAAGG CGAGAAGGAG CTGTTCAATC GATTCAGTGT TTTTTCATGG TATTGCTTCT GCATATTAAC AGGGACTCGT CCAAATAATG GATTACCTAA TGCAAAAGAT TTAGACCTTC AAGTTGGTTG GTATCAAGTC GCTGACAAGC CTAATAAAGT GACACAAAAC CATAGATTAA TACCACTCTG CTGCTCACTT GTAAAGCTGC TCAAGCTTTA TAGGTCCTAT CTAAAAGCGA TTGATAGACC TTACTTAACT GCATTCAGCA CGGCAATCCA TGTCATTAAG TCTGGTGGCG ACATTCCTTT CTTGAACTTA CTAGATGCAG AATTATACAA GTTAGCACCG ATCAAACGAG GGAGTGTTTC TAAAAAGACA CAAGAGCTGT CCCCGTTTCA TGACCCTTAT GGCACTAGGC ATTTTGTTAG AGTGGATTTA GAGCGACAAG GGCTAAGTAT GACCTTAATT AACGCGGTCA TAGGTCATGA GAAACCAGGA GCAGAGGCAT TGAGCTCATA CTCTTCAGTA AGTAACGCAG CGATCAAAAG TGTTGGTTCT AATTTTGAGC AAATCGCTTT AGAACTTGGT TTGCAGGACT TTAGTGACAT CATTTGTAAA CTCATAGAGG TACACCCTTT TGTTAAAGAA TATATTTCCC CCGAAAATCG TTGA
|
Protein sequence | MKDSAEEMVI VDLADLQKAL ELATSELDTE LVEALNELII DLHRAVTSEI SLKEVDLSRL AEINFFDYQI SRKWFKGKSL EHQLIAILID ATSKDTNKSL WIAVVLYISL VLKIHGKDKE SERLIKRFKT AYFYKTRNYQ WIWNELPNLD KTEEVTHALI LNTFALMLDK LNENKAEAEA NRVRGIVETE ATTKFRDKKL NQISEIKKYI EAAYYPHRKS PKKAPKPKTK SKSTSTNKNE GEGRTKKLRP PTLSDNVERT PAATSFNDID SPISKRDWAV FDAFYVPDST IDYATKEEAF DVMPPRVEIY WPKTQTQNRG RRSFELDAVD FSVKQQHISL KELELPSDVN MLSTTSCKLI FNQLSSDWKS NDKKMSLIAA ILLLSMITAC PVASLIEKGF IEKSGLFYIG KRKGYLQSKL GVTTIEEYSD NNLNSTDLIK IPLPVSLLKA AIEASKSQIK IEDIEAYVKR LKESLNIVYT TISRIESALH FILRRFVEGS NSHIADILCR IDASQAAAKY YSSHSHQELI GHYKKALQFM NIHNCFDLDY IDSHSEDFLT GSGFALKLES VRQFFQRLRS WVIESQGEKE LFNRFSVFSW YCFCILTGTR PNNGLPNAKD LDLQVGWYQV ADKPNKVTQN HRLIPLCCSL VKLLKLYRSY LKAIDRPYLT AFSTAIHVIK SGGDIPFLNL LDAELYKLAP IKRGSVSKKT QELSPFHDPY GTRHFVRVDL ERQGLSMTLI NAVIGHEKPG AEALSSYSSV SNAAIKSVGS NFEQIALELG LQDFSDIICK LIEVHPFVKE YISPENR
|
| |