Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0726 |
Symbol | |
ID | 5206650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 867005 |
End bp | 868210 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640598946 |
Product | phage integrase family protein |
Protein accession | YP_001279629 |
Protein GI | 148652536 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000125813 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000000856927 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGGCTAGCA TTAGAAGTAG GGGAAAAAAG CTGTTTGTTG ACTTTCGATA CTTAGGAGTC CGCTGTCGCG AAACAACAAA TTTGATTGAC ACCCCTGAAA ACCGTAAGAA GTTGCAAAAA ATAATTGAAA GGATGGAAGC TGAAATTGTT TTGGGTACTT TCAATTACGC TCAGTACTTC CCCAAGAGCG ATAAAGCTTC AAAAATGATG GCTTTAAATG ATCGCAAGGA GTGTATAAAC ACAAGTATGC CGTCATTTAA GCAGTTTGCA GAGCTCTGGT TTTCAGAAAA AGAAATTGAA TGGCGTGATA CGTATAAACG CAAAATCAGA GAGATTATCG ATATGTACCT TCTACCTGAA TTCCAGGGGA GGCCCATCGA TACAATCAAA AAGACAGAGG TATTAGCCTT CCGCTCAGCA CTCGCCAAAG TAACTCGCGG AAAAGTTAAA AAACCTCTGT CAGCGGCACG CATCAACTCA ATAATGGTAC CTCTGGGTAT GATACTAAAA GAAGCTTCCA AACGCTACAA GTTTGAAAAT CCTTATGAGG ACATAAAATC GCTTAAGGAA CCAAGAACGA GTATTCAGCC TTTCACGTTA GATGAAGTTT GGAAATTTAT TAACTGGGTT AGGGAGGATT ATCGAAACTA TTATCTTGTG CGCTTCTTTA CAGGCATGAG AACCAGCGAG ATTGACGGTT TAACTTGGGA GAATATTGAT TTTGACCGCC GAGAAATCGT TATCAATCAA GCACTGGTTA AAGGCAAAAT TGTGCCGCCT AAAACCCAAG AGTCTTATAG AGCCATTCAA ATGTCTCCAT GGGTCTATGA TGCTTTAAAA GAGCAGCACA AGGTTACTTA TAAGCGTTCT GAATATGTCT TTTGTTCGCA TACTGGCGAG CCGCTTGACT ACAACAATGT GAATAAGCGT GTTTGGCACC CTACGCTCAA GGCATTAGGC CTTAAAAAAC GCAATGCCTA TCAGACTAGG CATACTGCTG CGACTCTCTG GCTAGCTGCT GGTGAGAGCC CTGAGTGGAT TGCTTATCAG ATGGGTCATT CAACTACCAA GATGCTATTC AATACATACA GCCGCTATGT GCCTAACATG ACACGGCAGG ACGGTAGTGC TTTTGAGGCC CTCGTCAATC GTAGTCAATT GCAAATAGAA AAGAACAATA AGGAGACGCA AAATGAAGAA GATTAA
|
Protein sequence | MASIRSRGKK LFVDFRYLGV RCRETTNLID TPENRKKLQK IIERMEAEIV LGTFNYAQYF PKSDKASKMM ALNDRKECIN TSMPSFKQFA ELWFSEKEIE WRDTYKRKIR EIIDMYLLPE FQGRPIDTIK KTEVLAFRSA LAKVTRGKVK KPLSAARINS IMVPLGMILK EASKRYKFEN PYEDIKSLKE PRTSIQPFTL DEVWKFINWV REDYRNYYLV RFFTGMRTSE IDGLTWENID FDRREIVINQ ALVKGKIVPP KTQESYRAIQ MSPWVYDALK EQHKVTYKRS EYVFCSHTGE PLDYNNVNKR VWHPTLKALG LKKRNAYQTR HTAATLWLAA GESPEWIAYQ MGHSTTKMLF NTYSRYVPNM TRQDGSAFEA LVNRSQLQIE KNNKETQNEE D
|
| |