| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0716 |
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| Symbol | |
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| ID | 5206393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 857704 |
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| End bp | 858573 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640598937 |
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| Product | Sec-independent protein translocase, TatC subunit |
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| Protein accession | YP_001279620 |
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| Protein GI | 148652527 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00206477 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAGCCTAT TTAAACGGCA AAAAAGTCGA CAAGAAAAAA TAACAGATAT AGAGTTTGAG
GCGCCAACAG ATACAACACA GAATAGTGAG TCTGGAGATA CGTTAGGTAC GCTTGGCGAT
ATGCCTATTA CCGGACATTT AATCGAGCTG CGTACGCACT TAATAAGAAT ATGCGTGGTC
GTCTTAATTA TATTCTTAGT ATTGGTGGGA TTTTCACGCG AGCTTTATAA TCTTTTATCA
GACCCATTAG TGGCGCAGTT ACCCATCAAT TCGACCATGA TTGCCACTGA TATAACGTCA
AACTTTATGG CACCCATTCG CTTAACGATA TTCGTCGCCG CATTTTTAGC AATGCCTTAT
ATCCTGTATC AAATTTGGTC ATTTGTAGCT TCCGGCTTAT ATAAAAAAGA GAAGAAAATT
GCCATTCCTG TACTGCTATC TTCGATATTT CTATTTTATG CTGGTGTTGC TTTTTCCTAC
TTTGTCGTAC TCAAAGGGGT ATTGAAATTT TTTATTATGT TCGCTCCGCA GAACGTTATA
CCAATGACCG ATATTGACAG TTATCTGAGC TTTGCCCTCA AGCTATTTAT GGTGTTTGGA
CTGACTTTTG AGATTCCAGT GGTTACCTTA TTGCTGATAA TGGCCGGAAT CGTTTCTACT
CAAATTTTAG AAGATAAGCG TCGTTATATC ATAGTCGGCT GTTTTGGGAT CGCCGCGGTA
GTGACACCGC CTGATGGTGT ATCAATGCTG TTGTTGGCGA TTCCTATGTG GCTATTATTT
GAGCTGGGTT TACTCTTAGC AAAGATATTA ATTAAAAATG AACGAAATAA TGATTTAGTC
TCAGGGAATG AAACATTAGA AAGTAGCTAG
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| Protein sequence | MSLFKRQKSR QEKITDIEFE APTDTTQNSE SGDTLGTLGD MPITGHLIEL RTHLIRICVV
VLIIFLVLVG FSRELYNLLS DPLVAQLPIN STMIATDITS NFMAPIRLTI FVAAFLAMPY
ILYQIWSFVA SGLYKKEKKI AIPVLLSSIF LFYAGVAFSY FVVLKGVLKF FIMFAPQNVI
PMTDIDSYLS FALKLFMVFG LTFEIPVVTL LLIMAGIVST QILEDKRRYI IVGCFGIAAV
VTPPDGVSML LLAIPMWLLF ELGLLLAKIL IKNERNNDLV SGNETLESS
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