Gene PsycPRwf_0710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0710 
Symbol 
ID5206311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp850338 
End bp852044 
Gene Length1707 bp 
Protein Length568 aa 
Translation table11 
GC content46% 
IMG OID640598931 
ProductCopA family copper resistance protein 
Protein accessionYP_001279614 
Protein GI148652521 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2132] Putative multicopper oxidases 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01480] copper-resistance protein, CopA family 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0956103 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAA AGAACATACT GAACCGCCGA CGTTTTTTAA CCGGATCCTC TGCTGTCCTT 
GGTGCCTCCT TGATGCCGAC TATTGCTAGT AGCGCATTGG GACAATCGAG TCGCTCAGGC
AGTCAGGGCG CTACTATTAA CAGTGATAAA CCCGATCATA AAGTACCCAT ACTGACAGGC
AAAGAGTTTG ATCTTTATGT CAGCAAAAAA CCCATCATTG TTGATGGCAA GTCAAGCACG
GCGACGCTCA TTAATGACTC ATTACCAGCG CCAACGCTAA AAATGCGCGA GGGCGATACG
GTAGTGATAC GCGTCCATAA CCAAATGAAT GAGTCGACCT CTATTCATTG GCATGGTCTA
CTAGTACCGT TTGAGATGGA TGGCGTGCCC GGCATTAGTT TTGATGGTAT ACCAGCAAAT
AGCACCTTTA CGTATAAATT TACGCTGAAA CAATCTGGCA CTTATTGGTA TCACTCGCAC
ACTGGATTCC AAGAACAAAC CGGTATGCGC GGGGCCATCG TCATTGAGCC GAAAGGGCGC
GAACGTCATC CTATCGAGGA AGACCATGTC ATTTTGCTCA GTGATTGGAC GCACCGTGAC
CCGCACAACT TGGTTAAACT ATTAAAGCAA CGCGCAGACT TTGATAATTA TCATTTACCA
GATTTTAAAA AGCTACTGTC CGATATTGCC GCAACAGATC TAAAAGCTGC TTTTGATAAG
CGCAAAATGT GGAATCAGAT GCGCATGATG CCGACAGACT TTACTGATCT GTCTGGTGAA
AAAACCTTTA CCTATCTGAT GAATGGTAAA ACCACAGCGG CTAACTGGAC GCAACTTGTC
AAGGCTGGAC AGCCTGTCAA ACTACGTTTT ATTAATGGTT CAGCGCAGAC GATATTTGAT
GTACGCATCC CCGGCCTAAA AATGAAAGTC GTCGCGACGG ATGGGATTGA TGTCAGTCCC
GTCGATATCG ATGATTTCCG TATTGGGGTG GCCGAGACTT ATGATGTCAT CGTGACGCCC
ACTAAAGACG CGCATACCAT ATTTGCTCAA AACATAGATC GGTCAGGCTA TGTTGCGACA
ACGCTTGCTA CCAAAAAAGG TGCTCGTCCT GCGATACCTG CTATGGACAA AATCGAATGG
CTGACGATGG CCGACATGAT GGGCGCCATG GGATCGAATG GCTATAACGC TAAACATGCC
AAAACAGAAT ATGACTTTAA GTCCGATATG CGCGTTGATA GTCCGCGTAT GAACCTTGAT
GACCCTGGTA TTAATCTACG TAACATTGAT AGAAAGGTTT TGAATTATAG TCAGTTGCGC
TCTGTCGGCG ATGAGATAAT GGCAGAGCAG CGCAAACCCA CCAGAGAGAT TGAAATACAT
CTGACGGGAA ACATGGAGCG CTATATTTGG GCTCTAGACG GGGTTATGTT CAAAGATGCC
GCACCGGTCA ATATTAAGCC CAACGAGCGC GTACGTATTA CCTTAGTCAA TGACACCATG
ATGAATCATC CCATGCATTT GCATGGTATG TGGAGCGATC TGCGGATGCC TTCAGGTGAG
TTTCAAGTAC GTAAGCATAC GATAATGGTA CAGCCTGCAC AAAAGATAAG CTTTGATGTC
ACCGGAGAAG CTGGCAGATG GGCATGGCAT TGCCACTTGC TCTATCACAT GGAAGCAGGG
ATGTTTAGAG AAGTTGCCGT TGTTTAA
 
Protein sequence
MNKKNILNRR RFLTGSSAVL GASLMPTIAS SALGQSSRSG SQGATINSDK PDHKVPILTG 
KEFDLYVSKK PIIVDGKSST ATLINDSLPA PTLKMREGDT VVIRVHNQMN ESTSIHWHGL
LVPFEMDGVP GISFDGIPAN STFTYKFTLK QSGTYWYHSH TGFQEQTGMR GAIVIEPKGR
ERHPIEEDHV ILLSDWTHRD PHNLVKLLKQ RADFDNYHLP DFKKLLSDIA ATDLKAAFDK
RKMWNQMRMM PTDFTDLSGE KTFTYLMNGK TTAANWTQLV KAGQPVKLRF INGSAQTIFD
VRIPGLKMKV VATDGIDVSP VDIDDFRIGV AETYDVIVTP TKDAHTIFAQ NIDRSGYVAT
TLATKKGARP AIPAMDKIEW LTMADMMGAM GSNGYNAKHA KTEYDFKSDM RVDSPRMNLD
DPGINLRNID RKVLNYSQLR SVGDEIMAEQ RKPTREIEIH LTGNMERYIW ALDGVMFKDA
APVNIKPNER VRITLVNDTM MNHPMHLHGM WSDLRMPSGE FQVRKHTIMV QPAQKISFDV
TGEAGRWAWH CHLLYHMEAG MFREVAVV