Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0710 |
Symbol | |
ID | 5206311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 850338 |
End bp | 852044 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640598931 |
Product | CopA family copper resistance protein |
Protein accession | YP_001279614 |
Protein GI | 148652521 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2132] Putative multicopper oxidases |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR01480] copper-resistance protein, CopA family |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0956103 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAAA AGAACATACT GAACCGCCGA CGTTTTTTAA CCGGATCCTC TGCTGTCCTT GGTGCCTCCT TGATGCCGAC TATTGCTAGT AGCGCATTGG GACAATCGAG TCGCTCAGGC AGTCAGGGCG CTACTATTAA CAGTGATAAA CCCGATCATA AAGTACCCAT ACTGACAGGC AAAGAGTTTG ATCTTTATGT CAGCAAAAAA CCCATCATTG TTGATGGCAA GTCAAGCACG GCGACGCTCA TTAATGACTC ATTACCAGCG CCAACGCTAA AAATGCGCGA GGGCGATACG GTAGTGATAC GCGTCCATAA CCAAATGAAT GAGTCGACCT CTATTCATTG GCATGGTCTA CTAGTACCGT TTGAGATGGA TGGCGTGCCC GGCATTAGTT TTGATGGTAT ACCAGCAAAT AGCACCTTTA CGTATAAATT TACGCTGAAA CAATCTGGCA CTTATTGGTA TCACTCGCAC ACTGGATTCC AAGAACAAAC CGGTATGCGC GGGGCCATCG TCATTGAGCC GAAAGGGCGC GAACGTCATC CTATCGAGGA AGACCATGTC ATTTTGCTCA GTGATTGGAC GCACCGTGAC CCGCACAACT TGGTTAAACT ATTAAAGCAA CGCGCAGACT TTGATAATTA TCATTTACCA GATTTTAAAA AGCTACTGTC CGATATTGCC GCAACAGATC TAAAAGCTGC TTTTGATAAG CGCAAAATGT GGAATCAGAT GCGCATGATG CCGACAGACT TTACTGATCT GTCTGGTGAA AAAACCTTTA CCTATCTGAT GAATGGTAAA ACCACAGCGG CTAACTGGAC GCAACTTGTC AAGGCTGGAC AGCCTGTCAA ACTACGTTTT ATTAATGGTT CAGCGCAGAC GATATTTGAT GTACGCATCC CCGGCCTAAA AATGAAAGTC GTCGCGACGG ATGGGATTGA TGTCAGTCCC GTCGATATCG ATGATTTCCG TATTGGGGTG GCCGAGACTT ATGATGTCAT CGTGACGCCC ACTAAAGACG CGCATACCAT ATTTGCTCAA AACATAGATC GGTCAGGCTA TGTTGCGACA ACGCTTGCTA CCAAAAAAGG TGCTCGTCCT GCGATACCTG CTATGGACAA AATCGAATGG CTGACGATGG CCGACATGAT GGGCGCCATG GGATCGAATG GCTATAACGC TAAACATGCC AAAACAGAAT ATGACTTTAA GTCCGATATG CGCGTTGATA GTCCGCGTAT GAACCTTGAT GACCCTGGTA TTAATCTACG TAACATTGAT AGAAAGGTTT TGAATTATAG TCAGTTGCGC TCTGTCGGCG ATGAGATAAT GGCAGAGCAG CGCAAACCCA CCAGAGAGAT TGAAATACAT CTGACGGGAA ACATGGAGCG CTATATTTGG GCTCTAGACG GGGTTATGTT CAAAGATGCC GCACCGGTCA ATATTAAGCC CAACGAGCGC GTACGTATTA CCTTAGTCAA TGACACCATG ATGAATCATC CCATGCATTT GCATGGTATG TGGAGCGATC TGCGGATGCC TTCAGGTGAG TTTCAAGTAC GTAAGCATAC GATAATGGTA CAGCCTGCAC AAAAGATAAG CTTTGATGTC ACCGGAGAAG CTGGCAGATG GGCATGGCAT TGCCACTTGC TCTATCACAT GGAAGCAGGG ATGTTTAGAG AAGTTGCCGT TGTTTAA
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Protein sequence | MNKKNILNRR RFLTGSSAVL GASLMPTIAS SALGQSSRSG SQGATINSDK PDHKVPILTG KEFDLYVSKK PIIVDGKSST ATLINDSLPA PTLKMREGDT VVIRVHNQMN ESTSIHWHGL LVPFEMDGVP GISFDGIPAN STFTYKFTLK QSGTYWYHSH TGFQEQTGMR GAIVIEPKGR ERHPIEEDHV ILLSDWTHRD PHNLVKLLKQ RADFDNYHLP DFKKLLSDIA ATDLKAAFDK RKMWNQMRMM PTDFTDLSGE KTFTYLMNGK TTAANWTQLV KAGQPVKLRF INGSAQTIFD VRIPGLKMKV VATDGIDVSP VDIDDFRIGV AETYDVIVTP TKDAHTIFAQ NIDRSGYVAT TLATKKGARP AIPAMDKIEW LTMADMMGAM GSNGYNAKHA KTEYDFKSDM RVDSPRMNLD DPGINLRNID RKVLNYSQLR SVGDEIMAEQ RKPTREIEIH LTGNMERYIW ALDGVMFKDA APVNIKPNER VRITLVNDTM MNHPMHLHGM WSDLRMPSGE FQVRKHTIMV QPAQKISFDV TGEAGRWAWH CHLLYHMEAG MFREVAVV
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