Gene PsycPRwf_0704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0704 
Symbol 
ID5206518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp845488 
End bp846960 
Gene Length1473 bp 
Protein Length490 aa 
Translation table11 
GC content39% 
IMG OID640598925 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001279608 
Protein GI148652515 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR01386] heavy metal sensor kinase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.65645 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGATA AATTTAAGAA TCGACGCTGG CCTTTGTTAT GGCGTACTGT TTTTTTACTG 
ACAATATTTG TTGTTATCTC TCAAGTTGTT ATTTATATAT GGGTTCAGCG CTCTGTTAAC
GAGCACTTTG AGCAAATGGA CTCAGAGATT ATTACCCATG CAGCTTTTAA CCTGCGTAAA
CGCATGGTGA ATTTTAACGA TCACATAGAA CCTTTTACAG TGTCAAAGTC GCAAGCGCTA
ATTGATGCCA ATCATCTACA TTCTTCTTGG TTAGACTATG ATTTAAAAAC GTTAATATCA
GACAAAAACG GCAATTTATT GTCCAGCGAT CCCAGTAATT TCATCAATGA TCTACCGGCA
GATTTTAGCT TGTTACAACT ATTGCAGGAC TATCGCGATC AGCAGTTTAT GATCAAGATA
AATAATAGGC ATTACCGAGC CATTATCATT ACACATCAAG AGGTTTTGGC ATTTATTGCT
CTACCTATCG ATGTGCATCA TCAATATCTT ATCCAGTTTA ATCGCCAGCT GAGCTTGATA
CTTATCGCCA TTACCTTATT ATTGGTTTCA GTAGCAGCAC TAAGTGTACA CTGGGGTTTT
GCTCCCCTAG CTACTATCGT ACAAAAGATG AAAGGCATTA ATCTTCAAAG GTTAGATGAA
AGAATTGTGG TTGGCGATAT GCCGTTAGAA TTACGTCCAC TAACGGAGTC TTATAATTCT
ATGATGGTCA AGCTTGAAAG TAACTTTGAA TCATTATCAC GGTTTTCAGA CAATATCGCC
CATGAGCTAC GTACGCCAAT AGCGACGCTG AGTACGCAAA CGCAAGTCAT GTTAACTAAG
CCAAGAGAAA GCGACGAATA CATTGAGCAA TTGCATCATC AGCATGATAC GTTAAAGCAG
TTATCCGCCA TGATTAACGA TATGTTATTA CTGGCAAAAA CTCAAAAAGA GCTGAGTGAT
TCGCAAATCA GTCATGTCGA TATAGAGAGC TTGATCACAA AGCTTATAGA TTATTATGAG
ATGATTGCTG AGGATCGTGA GATAATCTTT GAAAAATCGG GTGATTTTAA AACAGTACTA
GGTGATAAAG GCTTATTGCA ACGGCTGTTT GCCAACCTGA TGTCAAATGC GATTTATTAT
GCGGCTAGTA ATAGCACTAT TATGATATCC GCTACTGTCC TCACTTCAAG CACCTCGCTT
AATGCGCCAA AAGACGATAT TCAATCCCCA GAGCAGCTCT GGTTAAGAAT AACTATGACC
AACCGTCTAG ACAAACCATT AAATCAGATT GAAGCCGATA AACTGTTTGA GCGATTCTAT
CGTCATGATA AAACGAATAC GATGCATTCA GGAACAGGCT TAGGCTTATC TATTGTGCAA
GCTATCGCCA ATGCTCATAA TGGCAAAGTT AGTATTACTA TCAAAGATGA GTGTCTTTTT
GAGGTTGCTG TAAAGTTGTT GATTGCCAGG TAG
 
Protein sequence
MRDKFKNRRW PLLWRTVFLL TIFVVISQVV IYIWVQRSVN EHFEQMDSEI ITHAAFNLRK 
RMVNFNDHIE PFTVSKSQAL IDANHLHSSW LDYDLKTLIS DKNGNLLSSD PSNFINDLPA
DFSLLQLLQD YRDQQFMIKI NNRHYRAIII THQEVLAFIA LPIDVHHQYL IQFNRQLSLI
LIAITLLLVS VAALSVHWGF APLATIVQKM KGINLQRLDE RIVVGDMPLE LRPLTESYNS
MMVKLESNFE SLSRFSDNIA HELRTPIATL STQTQVMLTK PRESDEYIEQ LHHQHDTLKQ
LSAMINDMLL LAKTQKELSD SQISHVDIES LITKLIDYYE MIAEDREIIF EKSGDFKTVL
GDKGLLQRLF ANLMSNAIYY AASNSTIMIS ATVLTSSTSL NAPKDDIQSP EQLWLRITMT
NRLDKPLNQI EADKLFERFY RHDKTNTMHS GTGLGLSIVQ AIANAHNGKV SITIKDECLF
EVAVKLLIAR