Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0704 |
Symbol | |
ID | 5206518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 845488 |
End bp | 846960 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640598925 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001279608 |
Protein GI | 148652515 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR01386] heavy metal sensor kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.65645 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGATA AATTTAAGAA TCGACGCTGG CCTTTGTTAT GGCGTACTGT TTTTTTACTG ACAATATTTG TTGTTATCTC TCAAGTTGTT ATTTATATAT GGGTTCAGCG CTCTGTTAAC GAGCACTTTG AGCAAATGGA CTCAGAGATT ATTACCCATG CAGCTTTTAA CCTGCGTAAA CGCATGGTGA ATTTTAACGA TCACATAGAA CCTTTTACAG TGTCAAAGTC GCAAGCGCTA ATTGATGCCA ATCATCTACA TTCTTCTTGG TTAGACTATG ATTTAAAAAC GTTAATATCA GACAAAAACG GCAATTTATT GTCCAGCGAT CCCAGTAATT TCATCAATGA TCTACCGGCA GATTTTAGCT TGTTACAACT ATTGCAGGAC TATCGCGATC AGCAGTTTAT GATCAAGATA AATAATAGGC ATTACCGAGC CATTATCATT ACACATCAAG AGGTTTTGGC ATTTATTGCT CTACCTATCG ATGTGCATCA TCAATATCTT ATCCAGTTTA ATCGCCAGCT GAGCTTGATA CTTATCGCCA TTACCTTATT ATTGGTTTCA GTAGCAGCAC TAAGTGTACA CTGGGGTTTT GCTCCCCTAG CTACTATCGT ACAAAAGATG AAAGGCATTA ATCTTCAAAG GTTAGATGAA AGAATTGTGG TTGGCGATAT GCCGTTAGAA TTACGTCCAC TAACGGAGTC TTATAATTCT ATGATGGTCA AGCTTGAAAG TAACTTTGAA TCATTATCAC GGTTTTCAGA CAATATCGCC CATGAGCTAC GTACGCCAAT AGCGACGCTG AGTACGCAAA CGCAAGTCAT GTTAACTAAG CCAAGAGAAA GCGACGAATA CATTGAGCAA TTGCATCATC AGCATGATAC GTTAAAGCAG TTATCCGCCA TGATTAACGA TATGTTATTA CTGGCAAAAA CTCAAAAAGA GCTGAGTGAT TCGCAAATCA GTCATGTCGA TATAGAGAGC TTGATCACAA AGCTTATAGA TTATTATGAG ATGATTGCTG AGGATCGTGA GATAATCTTT GAAAAATCGG GTGATTTTAA AACAGTACTA GGTGATAAAG GCTTATTGCA ACGGCTGTTT GCCAACCTGA TGTCAAATGC GATTTATTAT GCGGCTAGTA ATAGCACTAT TATGATATCC GCTACTGTCC TCACTTCAAG CACCTCGCTT AATGCGCCAA AAGACGATAT TCAATCCCCA GAGCAGCTCT GGTTAAGAAT AACTATGACC AACCGTCTAG ACAAACCATT AAATCAGATT GAAGCCGATA AACTGTTTGA GCGATTCTAT CGTCATGATA AAACGAATAC GATGCATTCA GGAACAGGCT TAGGCTTATC TATTGTGCAA GCTATCGCCA ATGCTCATAA TGGCAAAGTT AGTATTACTA TCAAAGATGA GTGTCTTTTT GAGGTTGCTG TAAAGTTGTT GATTGCCAGG TAG
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Protein sequence | MRDKFKNRRW PLLWRTVFLL TIFVVISQVV IYIWVQRSVN EHFEQMDSEI ITHAAFNLRK RMVNFNDHIE PFTVSKSQAL IDANHLHSSW LDYDLKTLIS DKNGNLLSSD PSNFINDLPA DFSLLQLLQD YRDQQFMIKI NNRHYRAIII THQEVLAFIA LPIDVHHQYL IQFNRQLSLI LIAITLLLVS VAALSVHWGF APLATIVQKM KGINLQRLDE RIVVGDMPLE LRPLTESYNS MMVKLESNFE SLSRFSDNIA HELRTPIATL STQTQVMLTK PRESDEYIEQ LHHQHDTLKQ LSAMINDMLL LAKTQKELSD SQISHVDIES LITKLIDYYE MIAEDREIIF EKSGDFKTVL GDKGLLQRLF ANLMSNAIYY AASNSTIMIS ATVLTSSTSL NAPKDDIQSP EQLWLRITMT NRLDKPLNQI EADKLFERFY RHDKTNTMHS GTGLGLSIVQ AIANAHNGKV SITIKDECLF EVAVKLLIAR
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