Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0667 |
Symbol | |
ID | 5206675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 811540 |
End bp | 813078 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640598887 |
Product | nitrate reductase, beta subunit |
Protein accession | YP_001279571 |
Protein GI | 148652478 |
COG category | [C] Energy production and conversion |
COG ID | [COG1140] Nitrate reductase beta subunit |
TIGRFAM ID | [TIGR01660] nitrate reductase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.812713 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCA GATCACAAGT AGGCATGGTG CTTAACCTCG ATAAATGTAT CGGTTGTCAC ACCTGCTCAG TTACCTGTAA AAACGTTTGG ACCAGCCGTG AAGGTATGGA ATACGCCTGG TTTAACAACG TAGAGTCAAA GCCGGGTATC GGTTATCCCA AAGAATGGGA GAATCAAAAT AAATGGAATG GCGGCTGGAT TCGTAATGCC AATGGCACGA TTAATCCACG CATCGGCGGT AAATTTAGAG TGTTAGCGAA CATCTTCGCT AACCCTGATT TGCCAGAGAT TGATGACTAT TATGAGCCGT TTGACTTTGA TTATCAGCAC TTGCACACCG CACCGATTAG CAATCATCAA CCGATTGCGC GTCCTCGCTC TGCCATTACT GGTAAGCGGA TGCAAAAAAT CGAGTGGGGC CCTAACTGGG AGGAAATCTT AGGCTCAGAG TTTGAGAAGC GTCGCCGTGA TAAAAACTTC GATAACGTGC AAGCAGACAT CTATGGCGAG TACGAAAACA CCTTCATGAT GTATCTGCCG CGTCTGTGTG AGCACTGCTT AAACCCAACT TGCGTGGCGT CATGCCCAAG TGGGGCGATT TATAAGCGTG AAGAAGACGG TATTGTGTTG ATTGACCAAG ACAAATGCCG CGGCTGGCGT ATGTGTATCT CAGGCTGCCC ATACAAAAAG ATTTACTACA ACTGGAAATC GGGTAAATCT GAAAAATGTA TCTTCTGTTA TCCACGTATC GAAGCGGGCA TGCCAACCGT ATGTTCTGAA ACCTGTGTTG GCCGTATCCG CTACCTTGGC GTGCTGTTAT ATGATGCTGA TAAGATTGCG GAAGCTGCGA GCACCCCAAA TGAGCAAGAC TTATACCAAG CACAGCTGGA TGTATTCTTA GATCCAAACG ATCCAGAAGT CATCGCTCAA GCATTAAAAG ACGGCGTACC TCAATCTGTG ATTGATGCGG CACAAAAATC ACCGGTTTAC AAACTGGCGA TGGACTGGAA ACTGGCACTG CCATTACACC CTGAGTATCG TACGCTACCT ATGGTGTGGT ATGTACCGCC TTTATCACCG ATTCAAAATG CAGCAGAAGC GGGCAAAGTG GGCATGGATG GTCTGATTCC AGATGTCGAC AGCTTACGTA TTCCACTGCG TTATTTAGCC AACATGCTAA CCGCTGGTGA TGAAGAGCCG GTACGCATGG CACTAAAACG CCTACTTGCC ATGCGCAGCT ACAAGCGTAT GCAATTGGTT GAAAAGCAAG AAGTACAAAG CATCCTAGAT GATGTGGGCT TAACCAAATT GCAAGTCGAA GAGATGTACC GCTATCTAGC GATTGCCAAC TATGAAGACC GTTTTGTCAT CCCAACGGCG CATAGAGAAG AGGCGATGAG TGATGCCTTC GCTGAGCGTA ATGGTTGCGG CTTTACCTTT GGTGAAGGCT GCTCAGGTAG CAGTGACACC AGCATGTTCG GTCAGAAAAA AGCAACCCGC CGTGACTTTA TTGACACCGT TCAAAAGTGG GAGGTGTAA
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Protein sequence | MKIRSQVGMV LNLDKCIGCH TCSVTCKNVW TSREGMEYAW FNNVESKPGI GYPKEWENQN KWNGGWIRNA NGTINPRIGG KFRVLANIFA NPDLPEIDDY YEPFDFDYQH LHTAPISNHQ PIARPRSAIT GKRMQKIEWG PNWEEILGSE FEKRRRDKNF DNVQADIYGE YENTFMMYLP RLCEHCLNPT CVASCPSGAI YKREEDGIVL IDQDKCRGWR MCISGCPYKK IYYNWKSGKS EKCIFCYPRI EAGMPTVCSE TCVGRIRYLG VLLYDADKIA EAASTPNEQD LYQAQLDVFL DPNDPEVIAQ ALKDGVPQSV IDAAQKSPVY KLAMDWKLAL PLHPEYRTLP MVWYVPPLSP IQNAAEAGKV GMDGLIPDVD SLRIPLRYLA NMLTAGDEEP VRMALKRLLA MRSYKRMQLV EKQEVQSILD DVGLTKLQVE EMYRYLAIAN YEDRFVIPTA HREEAMSDAF AERNGCGFTF GEGCSGSSDT SMFGQKKATR RDFIDTVQKW EV
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