Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0665 |
Symbol | |
ID | 5205374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 805820 |
End bp | 807202 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640598886 |
Product | nitrite transporter |
Protein accession | YP_001279570 |
Protein GI | 148652477 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2223] Nitrate/nitrite transporter |
TIGRFAM ID | [TIGR00886] nitrite extrusion protein (nitrite facilitator) |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTGTGA ATAAAGAAGA CTTAAAAGGG GGCAAGCTCA TCACTGACTG GCGCCCAGAA ATGGAAGATT TTTGGGAAAA CGGTGGTAAG CAGGTCGCCA GCCGCAACTT ATGGGTGTCT ATCCCAGCAC TGCTATTGGC CTTTGCGGTA TGGATGGTCT GGAGTGCGGT GATTGTTAAC TTGCCTGAGA TTGGCTTTGG CTTTGATGAG GGGCAGCTGT TTTGGCTGGC CGCTTTACCA GGATTGTCTG GGGCGACGCT GCGTATTTTT TATTCGTTTA TGGTGCCTAT CTTTGGTGGA CGTCGCTGGA CGGCCATCTC TACCGCGTCA CTGCTTATCC CTGCAGTGTG GATGGGCTTT GCGGTTCAAA ATCCTGATAC GCCCTTTAGC GTGTTTGCCA TGATTGCACT ACTGTGCGGC TTTGGTGGCG CAAACTTTGC GTCCTCTATG TCCAACATCT CGTTTTTTTA TCCTAAAGAT AAGCAAGGCA CAGCACTGGG TTTAAACGCA GGTCTGGGTA ACCTAGGTGT GTCTGTGATG CAGTTTGTGG TGCCTTTGGT AATCGGTTTT GGTGTGTTTG GCGCACTTGG CGGTGCACCG CAAGTCACTG AAGCGGGCAA AGCACTTTAT CTGCAAAATG CAGGCTTTAT CTGGGTGCCT TTTATTGCAC TGGTCTCTAT TGCTGCTTGG TTTTTGATGA ATGATATCGC CTCGGCAAAG GCATCGTTTA AAGATCAAGC GGTTATCTTT AAGCGCAAGC ACAACTGGAT CATGTGTGTG CTATATATGG CCACCTTTGG CTCGTTTATT GGCTTTTCGG CCGCCTTTCC GATGCTGATT AAAAAAGGAT TTCCGGATGT CAATGCGTTG CAATTTGCCT TTTTAGGCCC CTTAGTCGGT GCGTTATTCC GTCCTGCAGG TGGCTGGATT GCTGATAAAT TGGGCGGCGC CCGAGTGACA TTCTGGAACT ATGTGGTGAT GATATTGGCC GTAGTGGCGG TGATGTACTT CTTGCCAAGT GGCACCAGTG CCGGTAGCTT TACGGGGTAT CTGATCTCAT TTATGGTACT GTTTGTCACC ACAGGGATTG GTAATGGCTC AACCTTCCGT ATGATTCCAG TTATCTTTAG AACGGTATTA GAGCGTGAGC ATCCTGACAA AGTAGGCACA GAGCCTTTGT TTGTTGAGAT TCGCAAAGAG TCAGCAGCAG TGGTGGGCTT TACCTCAGCA GTAGCGGCTT ATGGTGCTTT CTTTGTGCCT AAGATGTTTG GCTCAGGCTT AGGTGTCAAT GGCACATTCA TCGCTTTGAT TGCCTATTAT GTGGTTTGTA TTGTCTTAAC CTGGTGGTAT TACAGCCGCA AAAATGCAGA GTATCCGTCA TAG
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Protein sequence | MGVNKEDLKG GKLITDWRPE MEDFWENGGK QVASRNLWVS IPALLLAFAV WMVWSAVIVN LPEIGFGFDE GQLFWLAALP GLSGATLRIF YSFMVPIFGG RRWTAISTAS LLIPAVWMGF AVQNPDTPFS VFAMIALLCG FGGANFASSM SNISFFYPKD KQGTALGLNA GLGNLGVSVM QFVVPLVIGF GVFGALGGAP QVTEAGKALY LQNAGFIWVP FIALVSIAAW FLMNDIASAK ASFKDQAVIF KRKHNWIMCV LYMATFGSFI GFSAAFPMLI KKGFPDVNAL QFAFLGPLVG ALFRPAGGWI ADKLGGARVT FWNYVVMILA VVAVMYFLPS GTSAGSFTGY LISFMVLFVT TGIGNGSTFR MIPVIFRTVL EREHPDKVGT EPLFVEIRKE SAAVVGFTSA VAAYGAFFVP KMFGSGLGVN GTFIALIAYY VVCIVLTWWY YSRKNAEYPS
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