| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0654 |
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| Symbol | |
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| ID | 5206384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 790825 |
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| End bp | 792588 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640598875 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001279559 |
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| Protein GI | 148652466 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATTAC TTAAGTTAAA GCGCTCTGAG ACTGTAAAAC CGCAAGCCTC TTTTGTGAGA
CGCCCTTGTG CGCCTACCTC GTATCATATA TTGACGCATT ATGCTAAGCG GCTCAATAGG
CATGCTGCGT ATTTGGCTCC CTTATCTTGG CAGCTTTCGG TGGCCGTAAG TCTCAGTGCC
CTATCAACCA TAGGCCACAC GGCACCTATA CATAGTGGCA GCGATGAGTA TGTCTTGTCA
CCGCAAAGCC CCAGTTATCA AAACCCCATC CCGGCGACCA ATGTAAAAAA GATTGGCGAA
AATCTAGACA AAGGCAGCTA TCAAACCATA CCGTTACACA GCATTGTCGA CCCAGCTTCA
GGGGTGGCCA TTGATGATGT GTATACCATT GATGTACCCG ACAAAATCAG TCTACAACAA
GCCCAAAACG TATTAATGCA AGTGTCACCC AAACTTGCCA GCAACAATGC CGGTATTGCA
GCAAATGAGC TGCAATCTGA AGCTACCAAA GGTCTCAACC AACCGCTGAT TTTTTTACGG
GCTGGCGCTA CCCGATATAG TGTGGATGCA GATGTGGATT TAACCGGTCT TAAATCCGGT
ATCAATGACA GCGTAAACCA AGCAATTCAA GACAATCCTA TTTTACAAAA TATTGATCCT
AATATTGTTA ATGCCATTCC GCCCATCATC AGTGACCGCC TACCCGATGA ATATAATATA
AAACGCAGTG GTACAAATAC CAGCGCAGGT GTTGCCATGC TGTGGCCGGT GTATACCGCT
GGGCGCACCC AAGCGGTCAC TGATCTGGCA GATGCGCGCA CTGAAGAGAG CCAAGCGGAC
GCCTTACTTG ATAAGGACGA CCTGCAAGCA ACCTTAATTA ATCGCTACTT CACCGCTCAG
CTTGCCATGC TCGCTGCTTA CTTACGTGAA GATGCCTTAA ATACGGTGAA AGAAACCGAT
CATATGGCGC AAAGATACCT AGAGGAAGGC TTTATATCAG GTGTTGAAAG ACTAGAGGCG
AAGACAGCGT TAGCAGAGGC TGAAAGTGAG GCGCTAAAAG CGCGCAATAA TGCTCAATTA
GCCATGACTG CCCTGCAGCG CCTATTGCGC TCACCAACAC CCATCAAGCC TACCAGCCCA
TTGTTTGTCT CCTCAAAGCC GCTACCTCCC TTAAAGTACT TCCAAGATTT GGCCTTAAAA
AACCATCCCG GTCTTAAAAA AGTCGATGCC AAATACGCCC AAGCAGAATC TTTAACCAGC
TTATCCAACA CCGGTTATAA GCCGACCGTT ACCTTATTCG GTTATCATGA AATTGATAAA
GATCCCAGCT GGATTGCGGG GGTTTCTGCC AGTTGGAAGC TGTGGGGTGG CTTGGACAAA
GGCGCACAGC ATGCTTCTGG TCAAGCACAA ATGCGCCAAG CCATATTGGC CAAAATCGAT
GTGAGTGACA ACATCTTATT GTTAGTAGAA AAAAATTGGC AATCGGTAGA AAATGCCCGG
GTCCGTTTCC AGTCATTAAA CAGCAATGTG CTGCTGTCTC AAGAGTTACT ACGCTACAAG
CAACTGGGCA TGAAAGAGGG GGTGAATACC GCCCTTGATG TGACTACTGC GCAAACCAAG
TACTTGCAAG CCCGCACCGA GCAAGCTGCT GCGGCCAATG ATTATGTACA GGCGCTTGCC
GCTTTAATGC AAAGCATTGG TACCCCAGAG GCCTTTAACG AATATATGGC CGTGGCCGAT
ATTAAGCTGC CCACGGTTTA TTAG
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| Protein sequence | MSLLKLKRSE TVKPQASFVR RPCAPTSYHI LTHYAKRLNR HAAYLAPLSW QLSVAVSLSA
LSTIGHTAPI HSGSDEYVLS PQSPSYQNPI PATNVKKIGE NLDKGSYQTI PLHSIVDPAS
GVAIDDVYTI DVPDKISLQQ AQNVLMQVSP KLASNNAGIA ANELQSEATK GLNQPLIFLR
AGATRYSVDA DVDLTGLKSG INDSVNQAIQ DNPILQNIDP NIVNAIPPII SDRLPDEYNI
KRSGTNTSAG VAMLWPVYTA GRTQAVTDLA DARTEESQAD ALLDKDDLQA TLINRYFTAQ
LAMLAAYLRE DALNTVKETD HMAQRYLEEG FISGVERLEA KTALAEAESE ALKARNNAQL
AMTALQRLLR SPTPIKPTSP LFVSSKPLPP LKYFQDLALK NHPGLKKVDA KYAQAESLTS
LSNTGYKPTV TLFGYHEIDK DPSWIAGVSA SWKLWGGLDK GAQHASGQAQ MRQAILAKID
VSDNILLLVE KNWQSVENAR VRFQSLNSNV LLSQELLRYK QLGMKEGVNT ALDVTTAQTK
YLQARTEQAA AANDYVQALA ALMQSIGTPE AFNEYMAVAD IKLPTVY
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