| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0626 |
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| Symbol | |
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| ID | 5206278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 755209 |
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| End bp | 756315 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640598842 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_001279531 |
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| Protein GI | 148652438 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.511455 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAC TCAAGTTACG CATAAAAGAT AAGCACATAG ACCAACTTAA CCGCCTAAGC
GGTTCGGTTA ACTTTGCGTG GAATTATATT AATGCGTTAA GTTTTGAGCA TTTAAGGCGC
ACAGGTAAGT ACTTTTCGGC CTATGATTTA AGCCAATACA CCAAAGGCAG TGGTGAGTAT
TTAGGCTTAC ACTCGCAAAC TTTGCAAGCC ATCAACGAAA CTCATGCCAA ATCTCGTAAA
CAGTTTAAAA AAGCCAAACT TAATTGGCGA ACCAACCGAC CCGATGCCAA ACGAAAAAGC
TTAGGTTGGA TACCTTTTAA AAAGTCTGCT ATCAAGTATC TAAATACAAG ACAAACAGGT
AAAAAAGCAC TGAAATCAAC CATACAGCTA TCGCTCTGTA AAGGTCAAAA GCTTATCATA
GACGTATTCG ATAGCTACAA TTTGTCTTTG TATCAAATCA ATACGCTTGA GATAGTGCAA
GACAGCCGTA ATCGCTGGTA TGCCTGTATT ACCGTCAAAG ATTTTCCTAG ACAAGCAAGT
GGTAAAGGCA GCGTTGGTAT TGACTTAGGC TTAAAGGAAT CTGCTACCAC ATCAAACGGT
GATAAGCTAA TTATTAAGCA GACCCAAAAA TGGGCTAAAA AGCTTGCCAT CGCTCAACGT
GCAAACAATA AAAGCCGAGT AAAGGCAATC CATGCCAAAA TCAAAAATTC AAGATTAGAC
TTAATTCACA AGTTCACCAC CAAGCTAGTT CAAAATAATG CTTTAATTGT GGTTGGTGAT
ATTAAATCAC GCTCATTCAC CAATTCGATG ACCAACCTAG CTAAATCAAC ATACGATGCA
GGATGGTTTG AACTCAAAAG ACAACTGGAA TATAAATGCA AGTATGCAGG TTGTCAGCTT
GAGATAGTGA ATGAGAGTTA CACTACCCAA ACCTGTTCGT GCTGTCTTAA AATAAGTGAT
AGTAGTCCAA AAGGTAGAGC AGGTCTTGGA ATAAGAGGAT GGAGGTGTGC TGAGTGTGGC
ACATGGCATG ATAGAGATAT CAATGCTGCT AAGAACATCC TTGCGGTCGG GCTTGACCGT
CTAGCTGTAG CAATCCCCTC GGTTTAG
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| Protein sequence | MKTLKLRIKD KHIDQLNRLS GSVNFAWNYI NALSFEHLRR TGKYFSAYDL SQYTKGSGEY
LGLHSQTLQA INETHAKSRK QFKKAKLNWR TNRPDAKRKS LGWIPFKKSA IKYLNTRQTG
KKALKSTIQL SLCKGQKLII DVFDSYNLSL YQINTLEIVQ DSRNRWYACI TVKDFPRQAS
GKGSVGIDLG LKESATTSNG DKLIIKQTQK WAKKLAIAQR ANNKSRVKAI HAKIKNSRLD
LIHKFTTKLV QNNALIVVGD IKSRSFTNSM TNLAKSTYDA GWFELKRQLE YKCKYAGCQL
EIVNESYTTQ TCSCCLKISD SSPKGRAGLG IRGWRCAECG TWHDRDINAA KNILAVGLDR
LAVAIPSV
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