| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0622 |
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| Symbol | |
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| ID | 5206432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 748211 |
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| End bp | 749701 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640598838 |
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| Product | amidase |
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| Protein accession | YP_001279527 |
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| Protein GI | 148652434 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.240573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.237007 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAAAG AATACCCGCA ATATGATGCC ATAGGATTGG CAGCGCTTAT TAGATCCGGT
GAAATCAGTG CCAAACAGGC TCTAGATGCG GCTATATATC AGGCCAATAG GCTAAATCCT
AAGCTTAACG CCATCATTCA TCGATTTGAT GAGCGGGCAT TTAACGAAGT GCAGCGAGGT
TTGCCTCAAG GCATATTCAC TGGGGTGCCT TATTTATTAA AAGATTTAAA TTACTTATTT
GCCGATGAGC CGATTAAAAT GGGCAGCCGC AGCGTTCATA TTGTGCCAGA GCAAGACAAC
GAGCTGGTAA AACGCATGCG AGCCACTGGC GTCAATACCT TTGGTAAAAC CAATACCCCA
GAGTTTGGCT TAATTATTAC CACAGAGCCT AAGTCTTATG GCGCCACCCA TAATCCATTT
AAAAAAGGCT ATAGCAGCGG CGGCTCATCA GGTGGCAGTG CTGCAGCAGT GAGTGCCGGT
ATCGTGCCTA TGGCAGGTGG CGGTGATGGG GGTGGCTCTA TTCGCTTCCC ATCCGCTTGG
TGCGGCGTGT TTGGCTTAAA GCCCAGTCGT GGCCGCAATC CCAGTGGTCC TCTCTATGCT
GAAGGCTGGG AGGGAGCTGT GGCCGACCAT GTGATTACCC GCAGTGTGCG CGACAGTGCC
GCCATGCTTG ATGCCACGGC TGGTAGAGAG GTTGGCTCAG CGTTTGTGAC ACAGGCCTCT
GATAACGGCC AGTTTTTACA GGCCACACAG ACACCGTCTA AACCGTTAAA GATTGCGCTG
ATGCAAGCGC CTTTGTTTCC AGGTGCCACA GTAGACAAAG AGGTGCTGGC GGTACTAGAA
AAAACAGCAC GGCAGCTTGA AGACATGGGG CACACAATAG ACTATGCCGC CCCAAACATT
GATATTGACC GCATGTGGCG AGATTTTCTT ACAGTGGTGT GTGCTCATAC GGCGCATTTT
GTGGAAGATT TGTCGCTGCG CTATGGGCCG CAGCAAGTTG CTAATCTGGA GCCACAGACT
CGAAATATGG TCATGATAGG ACGCTCGCTA AGTGTGATTG ACCTACTTAA AGCCAAGCAA
GGCTGGCATG ACGTACAGTA CCAGACCGGA CTGATTCTTG AGCAGTACGA TATGATTTTA
TGCCCCACGG TGCCGACGCC TGCAGTTAAG CATGGGGTGC TGCCGCCCAG TCGTATTGAT
GAGCTACTGC TTAATGTTAG CGGCTTGATT GATCGAGGCG TTAATCTGGG TAAATGGATT
TATAACTCAA GCTTGGTCGA GAAGCTAAGC GCACCGGTAT TAAGCAAAAT GGCCTTTACG
ACTTTGGGCA ATATTACAGG TCTACCGGCC ATGTCAGTCC CGCTAGGTAT GAGCAATAAG
GGCTTACCGA TTGGCATGCA ATTTATTGGG CGTATGAATG ATGAGGCGAG GCTTTTTGCT
TTGGCAGCAG ACTTTGAGCG GTCAGGACTA TTTACCGATC CGGCCATTTA A
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| Protein sequence | MFKEYPQYDA IGLAALIRSG EISAKQALDA AIYQANRLNP KLNAIIHRFD ERAFNEVQRG
LPQGIFTGVP YLLKDLNYLF ADEPIKMGSR SVHIVPEQDN ELVKRMRATG VNTFGKTNTP
EFGLIITTEP KSYGATHNPF KKGYSSGGSS GGSAAAVSAG IVPMAGGGDG GGSIRFPSAW
CGVFGLKPSR GRNPSGPLYA EGWEGAVADH VITRSVRDSA AMLDATAGRE VGSAFVTQAS
DNGQFLQATQ TPSKPLKIAL MQAPLFPGAT VDKEVLAVLE KTARQLEDMG HTIDYAAPNI
DIDRMWRDFL TVVCAHTAHF VEDLSLRYGP QQVANLEPQT RNMVMIGRSL SVIDLLKAKQ
GWHDVQYQTG LILEQYDMIL CPTVPTPAVK HGVLPPSRID ELLLNVSGLI DRGVNLGKWI
YNSSLVEKLS APVLSKMAFT TLGNITGLPA MSVPLGMSNK GLPIGMQFIG RMNDEARLFA
LAADFERSGL FTDPAI
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