Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0621 |
Symbol | |
ID | 5206431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 747329 |
End bp | 748036 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640598837 |
Product | pirin domain-containing protein |
Protein accession | YP_001279526 |
Protein GI | 148652433 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000898789 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.199637 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACTA TCTTACACAG ATCAAATACT CGTGGTGACG CTGACCATGG CTGGCTAAAA AGTAAACATA CCTTTAGCTT CGCCAACTAT TACAACCCTG CTCGTATGGG CTTTGGTGCT CTACGTGTGA TTAATGATGA TCACGTAGAA GGGGGTAATG GTTTTGGTAC GCATCCTCAC CGTGATATGG AAATTATTTC TATTCCAACC TCAGGTAGAC TTGCGCATAA AGACTCTATC GGCACAAACG GCATCATCGA AAGTGGTGAG ATCCAAGTTA TGTCTGCTGG TACCGGTATT GTGCACAGTG AGATGAATGG CACCGCCAAT GAGCCAGTAA AATTCTTCCA AATTTGGGTT GTGCCTAACA AGCAAGGTGT TCAGCCTCGT TATCAGCAGT TAAAAATCGC TGATATGTTA CAGCCTAATG AGTTTGGTCA GATTTTATCG CCCAACCCAG ACGACGCTGG CGTATGGATT CACCAAGATG CCTGGTTCCA CATGGGTGAT CTAGATAAGG GCGTAACCGC TCATTACGAT CTAAAAAATA AAAATAATGG CGTCTATGCA TTGGTTATTG AAGGTCGAGT CAAGATTGGT GATGAAATCC TAGACAGACG TGATGGCATG GGTATCACAG AGGTAACAGG CTTTGATGTA GAAGCCTTAG CGGACTCTCG CGTGTTACTG ATGGAAGTAC CGGTTTAA
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Protein sequence | MKTILHRSNT RGDADHGWLK SKHTFSFANY YNPARMGFGA LRVINDDHVE GGNGFGTHPH RDMEIISIPT SGRLAHKDSI GTNGIIESGE IQVMSAGTGI VHSEMNGTAN EPVKFFQIWV VPNKQGVQPR YQQLKIADML QPNEFGQILS PNPDDAGVWI HQDAWFHMGD LDKGVTAHYD LKNKNNGVYA LVIEGRVKIG DEILDRRDGM GITEVTGFDV EALADSRVLL MEVPV
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