Gene PsycPRwf_0621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0621 
Symbol 
ID5206431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp747329 
End bp748036 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content44% 
IMG OID640598837 
Productpirin domain-containing protein 
Protein accessionYP_001279526 
Protein GI148652433 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000898789 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.199637 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTA TCTTACACAG ATCAAATACT CGTGGTGACG CTGACCATGG CTGGCTAAAA 
AGTAAACATA CCTTTAGCTT CGCCAACTAT TACAACCCTG CTCGTATGGG CTTTGGTGCT
CTACGTGTGA TTAATGATGA TCACGTAGAA GGGGGTAATG GTTTTGGTAC GCATCCTCAC
CGTGATATGG AAATTATTTC TATTCCAACC TCAGGTAGAC TTGCGCATAA AGACTCTATC
GGCACAAACG GCATCATCGA AAGTGGTGAG ATCCAAGTTA TGTCTGCTGG TACCGGTATT
GTGCACAGTG AGATGAATGG CACCGCCAAT GAGCCAGTAA AATTCTTCCA AATTTGGGTT
GTGCCTAACA AGCAAGGTGT TCAGCCTCGT TATCAGCAGT TAAAAATCGC TGATATGTTA
CAGCCTAATG AGTTTGGTCA GATTTTATCG CCCAACCCAG ACGACGCTGG CGTATGGATT
CACCAAGATG CCTGGTTCCA CATGGGTGAT CTAGATAAGG GCGTAACCGC TCATTACGAT
CTAAAAAATA AAAATAATGG CGTCTATGCA TTGGTTATTG AAGGTCGAGT CAAGATTGGT
GATGAAATCC TAGACAGACG TGATGGCATG GGTATCACAG AGGTAACAGG CTTTGATGTA
GAAGCCTTAG CGGACTCTCG CGTGTTACTG ATGGAAGTAC CGGTTTAA
 
Protein sequence
MKTILHRSNT RGDADHGWLK SKHTFSFANY YNPARMGFGA LRVINDDHVE GGNGFGTHPH 
RDMEIISIPT SGRLAHKDSI GTNGIIESGE IQVMSAGTGI VHSEMNGTAN EPVKFFQIWV
VPNKQGVQPR YQQLKIADML QPNEFGQILS PNPDDAGVWI HQDAWFHMGD LDKGVTAHYD
LKNKNNGVYA LVIEGRVKIG DEILDRRDGM GITEVTGFDV EALADSRVLL MEVPV