| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0607 |
|---|
| Symbol | |
|---|
| ID | 5206016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 729816 |
|---|
| End bp | 730631 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640598823 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_001279512 |
|---|
| Protein GI | 148652419 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.837549 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCACA ACACCAACAC AGCAACTCGC CCACAGGATG GGTTAACAGT TGCTCAAAAG
TGGATTGCTT TTCGCACTAT TTTGGTAAAA GAAGTACGCC GTATTTTACG TATTTGGCCC
CAAACGCTGC TGCCTCCGGT GATTACCATG AGCTTGTATT TTGTCATCTT CGGTAAGATG
ATCGGCTCCC GCGTTGGCGA GATGGGCGGG GTGCCTTATA TGCAGTTTAT TGTGCCAGGC
CTGATTATGA TGTCGGTCAT TACCAACAGC TACTCAAACG TGGTCTCAAG CTTTTTTAGC
GCCAAATTTA CGTCAAGTAT TGAAGAGCTT TTGGTATCTC CGGTATCTAA GCATTCCATA
TTATTAGGCT ATGTTGGTGG CGGTGTTTTC CGTGGTTTAA TGATTGCCAT TATTGTGTCT
ATTGTGGCGC AATTTTTTAC CAACTTAGGC ATTGAGCACT GGTTTGTGAT GATATTTACG
GTGCTTGGTA CCTCGGTGCT ATTTTCATTG GGTGGTTTTA TTAACGCAGT GTTTGCCCGC
TCTTTTGATG ACATCTCAAT TATTCCAAGC TTTGTGCTCA CCCCGTTAAC TTATTTGGGC
GGTGTGTTTT ATTCACTGGA GAATTTGTCA CCTTTTTGGC AAAACGTTTC GCTACTCAAC
CCTATTGTGT ATATGGTGAA CTCGTTTCGA TATGGCATCT TAGGGTATTC AGATGTGAAT
GTGTGGGCAT CCATGGCGGC CATATTCGTC TTTTGTTTGA TTTTTTATGT CATCGCTTAT
CGTTTATTAG ATAACGGCTC ACGCTTAAGA CTGTAA
|
|---|
| Protein sequence | MSHNTNTATR PQDGLTVAQK WIAFRTILVK EVRRILRIWP QTLLPPVITM SLYFVIFGKM
IGSRVGEMGG VPYMQFIVPG LIMMSVITNS YSNVVSSFFS AKFTSSIEEL LVSPVSKHSI
LLGYVGGGVF RGLMIAIIVS IVAQFFTNLG IEHWFVMIFT VLGTSVLFSL GGFINAVFAR
SFDDISIIPS FVLTPLTYLG GVFYSLENLS PFWQNVSLLN PIVYMVNSFR YGILGYSDVN
VWASMAAIFV FCLIFYVIAY RLLDNGSRLR L
|
|---|
| |