Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0604 |
Symbol | |
ID | 5206627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 726229 |
End bp | 727203 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640598819 |
Product | hypothetical protein |
Protein accession | YP_001279509 |
Protein GI | 148652416 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000348836 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGATGGC AAGATGAACA GACTCAACAG GATGTTAAGT TGAGACAAAG CAACCGACCA GATACTGGGT TTTTGTCTTG GTCGAATTAT ATAAAGGTGC ATAAAGAAGA TGCTGCTAAG CGGTATGAAG TGGCACAAGC TTTTTTGCCG TGGCCGCTGG GCTTTAAAGA GTCGGTGCTG GCCTTAAGAG CGCTTATTAG AGATAAAAAA AAGCAACAGG TTGACTTTGA GTCTGAGCTG CACTCTTTAT ATCACTTAGC AGCTTGGGAG TCCTTCTATC CTAAGCATTC CACAGCACTT GATGAGCCAG GCTTCAAAAT ATTTGATTAT ATGCCTGGGG GTATGATTAC GGCTTTGGAA ATAGAGTATC AAAAGCTTGG GTATGAACAA TTAAAGCTGA TTAATAAGAC CGATGCCAAG CTGTTGGTAC AGTATTATGG CGAGCCGCAG CAGCACAGCA CCTTATATGC CTTATACCCT AAATTGTGGC AACAAGCTGA AGCTCGATAT GCTAAGAGCT TGGATGCCAG CAATAAGGCG GCGGATATTC AATTAACCTG CCAAGCGCTG ACTCAGCCAA AAGCTCGGGG TAATACGCAC AATACCTCTA CTCAAGCCAG TACGTTGCCT GCTTCTGGTC TGAGTAGTGC CTCAAAAAAA TATGATGCAA CAGGCAAGGT GATAGCACCA GCTGCGAGAG CGCCTAGACC AAAAAAATAT CCCAAGCTAC AAGCACAGCA TAAGTTGGGT CAGCGCCCAA GTAGCAAGCA TAAGTATCTC AATAAAGCTG CCAAAGCCAA GCAGTTGTCT CTACTTATGG TACAGGCCAT AAAAGATCGG ACGATATTAC AACAACGGTT GTCTCATATT AATGTGGCCA ATATCAAGCA GACCCTTTCC AATAAAAAGC TGTTGTCTGT ATTGGGCGTA AGCTATCTGG TGGTTAACAG AGCCAGAAGG CTGCGTACTA AATAA
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Protein sequence | MRWQDEQTQQ DVKLRQSNRP DTGFLSWSNY IKVHKEDAAK RYEVAQAFLP WPLGFKESVL ALRALIRDKK KQQVDFESEL HSLYHLAAWE SFYPKHSTAL DEPGFKIFDY MPGGMITALE IEYQKLGYEQ LKLINKTDAK LLVQYYGEPQ QHSTLYALYP KLWQQAEARY AKSLDASNKA ADIQLTCQAL TQPKARGNTH NTSTQASTLP ASGLSSASKK YDATGKVIAP AARAPRPKKY PKLQAQHKLG QRPSSKHKYL NKAAKAKQLS LLMVQAIKDR TILQQRLSHI NVANIKQTLS NKKLLSVLGV SYLVVNRARR LRTK
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