Gene PsycPRwf_0584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0584 
Symbol 
ID5205147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp703692 
End bp704402 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content48% 
IMG OID640598799 
Productribulose-phosphate 3-epimerase 
Protein accessionYP_001279489 
Protein GI148652396 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.821706 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCA CCCAATCAGC AGCTACCCCA CGTGAGTATC TAATAGCCCC CTCCATTCTT 
TCTGCAGATT TTGCCCGCTT GGGTGAAGAG GTAGAGACGG TATTGCAAGC TGGGGCCGAT
GTGATTCACT TTGATGTGAT GGACAACCAC TATGTGCCAA ACCTCACCTT CGGCAGCATG
ATTTGTAAAG CACTGCGTGA TTACGGCATC GACGCGCCCA TCGATGTGCA TTTAATGGTA
TCACCGGTTG ACAGTATGAT TGAGCAGTTC TTAGAGTCCG GTGCCAGTAT CATCACCTTC
CACCCTGAAG CAAGCAATCA CATCGACCGC TCATTACAAA TGATCAAAGA TGGCGGTGCA
AAATGTGGTT TGGTATTAAA CCCAGCCACG CCGCTGCATT ATCTAGATTA TGTGATGGAT
AAAGTGGATC AAATCTTATT GATGAGCGTC AACCCAGGTT TTGGTGGTCA GTCTTTTATT
GACGGTACGT TAGACAAGAT CAAACAAGTG CGTCAGCGTA TCGATGCCAG CGGTCGTGAC
ATTCGTCTAG AAGTAGATGG CGGCGTAAAA GCCAATAACA TTAGAGCCAT TGCTGAAGCG
GGCGCTGATA TGTTTGTGGC AGGCTCAGCC ATTTTTAATC AGCCAGACTA TAAACAGGCT
ATTGATGAGA TGCGCCATGA GCTAAGTCTA GTGGGTGCCC ATCAAGCCTA G
 
Protein sequence
MSSTQSAATP REYLIAPSIL SADFARLGEE VETVLQAGAD VIHFDVMDNH YVPNLTFGSM 
ICKALRDYGI DAPIDVHLMV SPVDSMIEQF LESGASIITF HPEASNHIDR SLQMIKDGGA
KCGLVLNPAT PLHYLDYVMD KVDQILLMSV NPGFGGQSFI DGTLDKIKQV RQRIDASGRD
IRLEVDGGVK ANNIRAIAEA GADMFVAGSA IFNQPDYKQA IDEMRHELSL VGAHQA