Gene PsycPRwf_0570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0570 
Symbol 
ID5206082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp685307 
End bp686194 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content46% 
IMG OID640598785 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001279475 
Protein GI148652382 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00501842 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAGATTA AATCATTCTT GCATGAGGAC ACCGAAACGT ACACGCACGT ATTAATCGAT 
ACCGGCAACA AGGTGTGTGC CATTATAGAT CCTGTGCTTG ACTATGACTT TAAATCGGGT
CACACCAGCA CCAAGTCAGC TGAGCAAGTG GTGCAGTTTA TTAATCAGCA ACAGCTTAAC
GCTGCCTATA TTATTGAGAC CCATGCTCAT GCAGACCATT TATCAGCGGC TCAATATTTA
AAGCAGCAGC TGGGCGCACA GCTGGTAATA GGCAAACCCA TTACGGAAGT GCAAAAGATC
TTTAAACACG TGTTTAACTT GGATATGGGC TTTAAAACTG ATGCCAGTCA GTTCGATAAG
TTAACTGAAG AGGGCACCCA GTTTATGCTC GGTGATATTG AGCTGACTGT GATGCATGTG
CCTGGACATA CGCCAGCAGA CATGGCCTAT ATTGCCAAAA ATACGGCAGA TACCACGCAG
CCATTGGCCA TATTTGTAGG GGATACTTTG TTTGCTCCAG ATGTTGGCAC CGCACGTGTT
GATTTTCCGG GCGGTGATGT TGATGCGTTA TACGAATCTA TCCAAAAGAT TCTAGCGCTG
CCTGAGGACA CGGTCATTTA TCTTTGTCAT GACTATCCAC CACAAGACAG AACACATTCA
CCAGTGACCA CGGTTGGGGC GCAAAAAGCG CATAATATCC ATGTGCACCA AGGCATTAGT
CAGGCGCAAT TTGCAAAAAT GCGCACTGAA CGGGATGCCA CCTTGCAGAT GCCTCGATTG
ATTATCCCCT CTGTACAAGT CAATATCCAG GCAGGACATC TGCCTGAGCC AGAAGACAAC
GGGGTGCGTT ATCTTAAGGT GCCGCTAAAT TTATTAGGAC AGTCATAG
 
Protein sequence
MEIKSFLHED TETYTHVLID TGNKVCAIID PVLDYDFKSG HTSTKSAEQV VQFINQQQLN 
AAYIIETHAH ADHLSAAQYL KQQLGAQLVI GKPITEVQKI FKHVFNLDMG FKTDASQFDK
LTEEGTQFML GDIELTVMHV PGHTPADMAY IAKNTADTTQ PLAIFVGDTL FAPDVGTARV
DFPGGDVDAL YESIQKILAL PEDTVIYLCH DYPPQDRTHS PVTTVGAQKA HNIHVHQGIS
QAQFAKMRTE RDATLQMPRL IIPSVQVNIQ AGHLPEPEDN GVRYLKVPLN LLGQS