Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0570 |
Symbol | |
ID | 5206082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 685307 |
End bp | 686194 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640598785 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_001279475 |
Protein GI | 148652382 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00501842 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAGATTA AATCATTCTT GCATGAGGAC ACCGAAACGT ACACGCACGT ATTAATCGAT ACCGGCAACA AGGTGTGTGC CATTATAGAT CCTGTGCTTG ACTATGACTT TAAATCGGGT CACACCAGCA CCAAGTCAGC TGAGCAAGTG GTGCAGTTTA TTAATCAGCA ACAGCTTAAC GCTGCCTATA TTATTGAGAC CCATGCTCAT GCAGACCATT TATCAGCGGC TCAATATTTA AAGCAGCAGC TGGGCGCACA GCTGGTAATA GGCAAACCCA TTACGGAAGT GCAAAAGATC TTTAAACACG TGTTTAACTT GGATATGGGC TTTAAAACTG ATGCCAGTCA GTTCGATAAG TTAACTGAAG AGGGCACCCA GTTTATGCTC GGTGATATTG AGCTGACTGT GATGCATGTG CCTGGACATA CGCCAGCAGA CATGGCCTAT ATTGCCAAAA ATACGGCAGA TACCACGCAG CCATTGGCCA TATTTGTAGG GGATACTTTG TTTGCTCCAG ATGTTGGCAC CGCACGTGTT GATTTTCCGG GCGGTGATGT TGATGCGTTA TACGAATCTA TCCAAAAGAT TCTAGCGCTG CCTGAGGACA CGGTCATTTA TCTTTGTCAT GACTATCCAC CACAAGACAG AACACATTCA CCAGTGACCA CGGTTGGGGC GCAAAAAGCG CATAATATCC ATGTGCACCA AGGCATTAGT CAGGCGCAAT TTGCAAAAAT GCGCACTGAA CGGGATGCCA CCTTGCAGAT GCCTCGATTG ATTATCCCCT CTGTACAAGT CAATATCCAG GCAGGACATC TGCCTGAGCC AGAAGACAAC GGGGTGCGTT ATCTTAAGGT GCCGCTAAAT TTATTAGGAC AGTCATAG
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Protein sequence | MEIKSFLHED TETYTHVLID TGNKVCAIID PVLDYDFKSG HTSTKSAEQV VQFINQQQLN AAYIIETHAH ADHLSAAQYL KQQLGAQLVI GKPITEVQKI FKHVFNLDMG FKTDASQFDK LTEEGTQFML GDIELTVMHV PGHTPADMAY IAKNTADTTQ PLAIFVGDTL FAPDVGTARV DFPGGDVDAL YESIQKILAL PEDTVIYLCH DYPPQDRTHS PVTTVGAQKA HNIHVHQGIS QAQFAKMRTE RDATLQMPRL IIPSVQVNIQ AGHLPEPEDN GVRYLKVPLN LLGQS
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