Gene PsycPRwf_0542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0542 
Symbol 
ID5206864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp645507 
End bp646385 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content50% 
IMG OID640598757 
Producthypothetical protein 
Protein accessionYP_001279447 
Protein GI148652354 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0494744 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000143432 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGATTTCGC CTATATCTTG TGTGACGCTT ATTTATCCTC AGTCTATTGC TGAGCAGGCC 
TTGATACTGA TTCAAGCGTT GCAGCAGCTG ATAGTAGAGG CTAAGCTGCC GCTGAGTATC
GAGGCGGTCG CCAGTGAGCA AAAGCTGACT CAAAAAATAC GCAAACAGCT CAGTCAGCAG
TATCAGCAGC CGCTACTGGT GATAGATGAC AAGCAGCAAC TGACCTTGTT GACTAATGGG
GTGAGTGTCT CGCCAGAATG GAATGGCCTA CAGCGTCGAG TGGTCAGTGC CGGCAGAAAG
TCAGAATTGC TGCTGCAAGC CACCAAGCTT ACTGCCAGCA GTCGGGTGCT TGATGCCACT
GCAGGCTTTG GTCATGACAG TTTGATTTTG GCCAGTAGTG GCGCCCAGCT TACCTTACTT
GAGCGTAATC CGTTGATGGT ATTATTGCTC AAGTATGAGC AGCAGATGAT GGCCAAGCAG
CCCAATTGGC AAAAACTGAT GGCGCGCTTG CACATAGTTT GTGCAGAGTC TACTGAATAT
ATGCAGCCTG CACCGACTGC CTGTGACTTG CAAGCCCAGA CTATCAGCCA CGCCTTTGAC
GTCATCTATC TAGACCCTAT GTTTCCAGAG AACAGCTATG CGCATAGCTC TAAAGGTGCT
AAGGTGGGTA AGCATATGCA GGCGCTACAC CAGATTGCTG AGCCACCTAG CCTTAAAGAA
GAGCAGGCCT TATTAAGCCT GGCCTTATCT TTTGTGGCCC CTGGGGGACG AGTGGTGGTC
AAAAGACCAA TACAGGCACC TGTTTTTGCC TCACAAGCTG CCAATGAAAG TTGGCAAAAC
GACGTGGTAC GCTTCGATGC CTACTTTACT TATTTATAG
 
Protein sequence
MISPISCVTL IYPQSIAEQA LILIQALQQL IVEAKLPLSI EAVASEQKLT QKIRKQLSQQ 
YQQPLLVIDD KQQLTLLTNG VSVSPEWNGL QRRVVSAGRK SELLLQATKL TASSRVLDAT
AGFGHDSLIL ASSGAQLTLL ERNPLMVLLL KYEQQMMAKQ PNWQKLMARL HIVCAESTEY
MQPAPTACDL QAQTISHAFD VIYLDPMFPE NSYAHSSKGA KVGKHMQALH QIAEPPSLKE
EQALLSLALS FVAPGGRVVV KRPIQAPVFA SQAANESWQN DVVRFDAYFT YL