Gene PsycPRwf_0541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0541 
Symbol 
ID5206863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp644574 
End bp645425 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content46% 
IMG OID640598756 
Productundecaprenyl pyrophosphate phosphatase 
Protein accessionYP_001279446 
Protein GI148652353 
COG category[V] Defense mechanisms 
COG ID[COG1968] Uncharacterized bacitracin resistance protein 
TIGRFAM ID[TIGR00753] undecaprenyl-diphosphatase UppP 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0858873 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000134855 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
TTGGATTTAC TACTCATTCT CAAAGCCGTC ATCATGGGTA TCGTCGAGGG CATTACTGAG 
TTTTTGCCCA TATCCAGTAC CGGTTATCTG ATTCTCTCTG CCGACTTGAT GAGCTTTTGG
ACCAAAGAAA AAGCCGATTT ATTTATCGTA GTTATTCAGC TGGGCGCTAT CTTGGCAGTC
ATTTATGAGT ATTGGGGGCG CTTATGGCAT GCTTTAATGG GTCTGATAAC GGGTAAATCT
GAAGGTCCTA ATGCGCTAAA AAACCCCCGT CAGCTGGGGC TTAGCCTGAT TGTGGCGACC
ATTCCGGTGA TGCTTGTCGG CTTTACGTTA GCCGATCAAA TCAAAGAGTA TCTATTTAAC
CCTTATACTG TAGCGATTAT GCTGATATTA GGGGGCCTGC TTATCTTCTA TGTTGAGCGT
AAGCAGATTC CGGTGATTGC TGAAGAGGCA GAAGATGTGA GTCTAAAAAC AGCGCTACTG
ATTGGTCTTA TGCAGTGTTT GGCGCTTATT CCTGGTACAT CGCGCTCAGG CTCTACCATT
ATCGGTGCGC TATGGCTGGG TGTGTCCCGC AAGGCTGCGG CAGAGTTTTC TTTTTTCTTA
GGCATCCCCG TGATTATTGG TGCCGGCTTG CTGGATTTAT TAAAACATAA AGACGTACTC
AGTAGTGGTC AAGATTGGCT GATACTGGGT GTTGGGGTAT TGGTATCCTT TGTGGTGGGT
TTGTTGTGTA TCCGCTGGCT GGTAGATTGG GTAAGTCGAC GTGACTTTAC CATATTTGCT
TGGTTGCGCA TTATCACAGG TATCATAGTG CTGTTGGTGG CTTGGATATT TGGTTATACC
ATTCAGGGTT AA
 
Protein sequence
MDLLLILKAV IMGIVEGITE FLPISSTGYL ILSADLMSFW TKEKADLFIV VIQLGAILAV 
IYEYWGRLWH ALMGLITGKS EGPNALKNPR QLGLSLIVAT IPVMLVGFTL ADQIKEYLFN
PYTVAIMLIL GGLLIFYVER KQIPVIAEEA EDVSLKTALL IGLMQCLALI PGTSRSGSTI
IGALWLGVSR KAAAEFSFFL GIPVIIGAGL LDLLKHKDVL SSGQDWLILG VGVLVSFVVG
LLCIRWLVDW VSRRDFTIFA WLRIITGIIV LLVAWIFGYT IQG