Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0535 |
Symbol | |
ID | 5206839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 638918 |
End bp | 640801 |
Gene Length | 1884 bp |
Protein Length | 627 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640598750 |
Product | ATP-dependent metalloprotease FtsH |
Protein accession | YP_001279440 |
Protein GI | 148652347 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000788844 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000000175333 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGTAAAAA ATACCTTATT GTGGCTAGTT GTTATCGGCG TATTAGTGCT GGTATTTAGC AACTTTGATA GCAGTAATGA GCCTGATACG CTCAATTACT CTGAGTTTGT AACTCAAGTC ACTGAGGACC AAATAAAAAG CGTCAAGATC GACGGTGAAC AAATCACTGG CGAAAAAGTC AACGGCTCGG AGTTCGAGAC CGTTCTTCCT GCAGTGGCGG ACGCAGAGTT AATGCCTACG TTGCGTGAGC ATAAGGTTGA GGTGCAAGGG GCAGCCCCCG AGCGTCAAAG CATTATGATG CAGTTATTAA TTGCAAGCTT CCCTGTTCTG CTAATTATCG GTATCTTCTT GTTCTTCATG CGTAATATGC AAGGCGGCGC TGGCGGTAAA GCCGGTGGCC CCATGAGCTT TGGTAAATCC AAAGCCAAAA TGCTGGGTGA AGACCAAATT AAAGTGACCT TTAATGATGT GGCCGGTGCA GAAGAAGCCA AAGAAGAAGT GGTCGAAGTG GTCGATTTCT TAAAAGACCC TGACAAATTC ACCAAATTGG GTGCCACCAT TCCTCGTGGT ATCTTAATGG TGGGCCCACC AGGTACGGGT AAAACCTTAC TTGCTAAAGC CATTGCCGGT GAAGCCAAAG TACCTTTTTT CTCAATCTCA GGTTCTGACT TTGTTGAAAT GTTCGTTGGT GTGGGCGCAT CACGTGTGCG TGATATGTTT GAGCAAGCCA AAAAGAATGC GCCTTGTATT ATCTTTATCG ATGAGATTGA TGCCGTAGGC CGTAGCCGTG GCACAGGCAT GGGTGGGGGT AATGATGAGC GCGAGCAGAC CCTAAACCAG CTATTGGTAG AAATGGATGG TTTTGAAGGT AACGACGGTA TTATCGTTAT TGCTGCCACC AACCGCGCTG ATGTACTTGA TAAAGCCTTA TTACGCCCAG GTCGTTTTGA CCGTCAGGTG CATGTGGGCT TACCAGACAT CAAAGGCCGT GAAGAGATTT TAAAGGTGCA TTTACGCAAA CTGCCAGCTA CCATTGGTGT AGATGTGAAT GCTCTTGCTC GTGGTACGCC AGGTTTTAGT GGTGCGCAGA TTGCAAACTT AGTGAATGAA GCTGCTTTAT TTGCTGCTCG TCGTAATAAG ACCAGTGTCG ATATGAACGA CTTTGAGGAT GCCAAAGACA AGCTATTTAT GGGTCCTGAG CGTAAGTCTA TGGTGCTGCG TGAAGAAGAA CGTCGTGCGA CCGCCTATCA CGAAGCTGGC CATGCTCTAG TCGCTGAGAT GCTACCAGGC ACCGACCCTG TGCATAAGGT TACCATCATG CCGCGTGGTT GGGCACTGGG TGTGACTTGG CAGCTGCCTG AGTTTGATCA GACCAGCTTA GATAAGTCAA AGATGTTGAA TGATATTGCG ATTTTATTTG GCGGGCGTAT TGCAGAAGAG GTCTTTGTTA ATCAAAAGAC CACAGGCGCA TCAAACGACT TTGAACGTGC GACTAAAATG GCGCGCGCTA TGGTGACCAA GTATGGTATG TCAGATGCAT TGGGAGTGAT GGTTTATGAA GATGATGATG CCTCTCAAGG TTATTTCGGC GGTGGTGCCC GTGCTATTTC TGAAGCCACA CAGCAAAAAG TGGATGAAGA GATCCGTCGT ATTTTAGAAG AACAGTACGC CATCGCTCGT GAGATTATCG AAGCCAATAA AGATAAGATG CATGCTATGG TTGAAGCGCT GATGAATTGG GAAACTATTG ATAGAGATCA ATTGCAAGAT ATCTTGGCAG GTAATGAGCC ACGTGCACCT CGCAATTATC AAGAAAAAGA TGTTACCCCA AAAAAGGAAG TCAGCTCTTC AGGTCCAACG CCGCCACCTT TACCTGCAAT GTAG
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Protein sequence | MVKNTLLWLV VIGVLVLVFS NFDSSNEPDT LNYSEFVTQV TEDQIKSVKI DGEQITGEKV NGSEFETVLP AVADAELMPT LREHKVEVQG AAPERQSIMM QLLIASFPVL LIIGIFLFFM RNMQGGAGGK AGGPMSFGKS KAKMLGEDQI KVTFNDVAGA EEAKEEVVEV VDFLKDPDKF TKLGATIPRG ILMVGPPGTG KTLLAKAIAG EAKVPFFSIS GSDFVEMFVG VGASRVRDMF EQAKKNAPCI IFIDEIDAVG RSRGTGMGGG NDEREQTLNQ LLVEMDGFEG NDGIIVIAAT NRADVLDKAL LRPGRFDRQV HVGLPDIKGR EEILKVHLRK LPATIGVDVN ALARGTPGFS GAQIANLVNE AALFAARRNK TSVDMNDFED AKDKLFMGPE RKSMVLREEE RRATAYHEAG HALVAEMLPG TDPVHKVTIM PRGWALGVTW QLPEFDQTSL DKSKMLNDIA ILFGGRIAEE VFVNQKTTGA SNDFERATKM ARAMVTKYGM SDALGVMVYE DDDASQGYFG GGARAISEAT QQKVDEEIRR ILEEQYAIAR EIIEANKDKM HAMVEALMNW ETIDRDQLQD ILAGNEPRAP RNYQEKDVTP KKEVSSSGPT PPPLPAM
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