| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0506 |
|---|
| Symbol | |
|---|
| ID | 5205396 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 602708 |
|---|
| End bp | 604012 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640598721 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001279411 |
|---|
| Protein GI | 148652318 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000261893 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAGC AATCAAAAAG TTCAAAAAAA AGCAAAGCAG TTGTAACCGG TCTAGACGTA
TTAGGCCATG TGGCACGCAA TAATTTAGAG CGTTTTGGCT CTATGCTTGA CAGTTTAAGT
GCCAAATCAG GCAAAGCCAG TCAATTTAAA GCGGTCGATT TATCTGACTA CAAAACCAGC
ACGGCCAGCA ACTTGTTAAG CCAACAAACC ATTAAGACCT CAGAGCAGCT ATTGGGTAAG
CGCTTTGCGA CTTATGGCAA ATATGCCAAA AAAGTTGTGC CAAACAGTAT TTATCAAAAG
GCGTCTGACA GCGTATTTTC ACAAGTGGCA AAATTGGCTG CCACATGGAG TGAAATCGAT
TTACCACGCG AGCAGCGCTT TGAGGGCATT CAGACGTTAA GCGATCAAGA GCGCAATGCG
TTGGCACGTG ATATAGCCAA CCAAAACCGT GCTTTAGCTA CTATAGGCGG TGTAACGGGT
CTGGCTGGTC TACCGGGTAT GTTGGCTGAT ACGCTGTGGT TGCTTTTGGT ATCACTACGC
ACGGTTTATC AGTTGGCCAC TGTGTATGAT AAACCCTTAA CCGGTAAGCA AGGTATTAAA
ATGGCGTATG CGGTGATTGG CAGCGCTGAC TTAAGCAAAA TGCAAGAAAA ACAGACGATT
TTAGCAGCGC TAGGTGTGGC CAAAGGTTTA ATTAGCAATG CAGATAATAC GGGTCTACGT
AGTGAGCTTT CAAAAGGCTT AGGCATTGCT GGCAGTAATA TTGAGTTTTA TGCCAAACAA
GTGGATAAGT TAGCAGAGCA GTTTAACTTC GACTTAGACA GCATTAATAT CAGCTGGATG
GGCAAGTTCT TACCGCTTGT GGCTGTGGGA ACTACGGTAC ATTACAACAG CCATTTGATT
GATCAAGTTA TCGGTGTGGC CAAGGCAACA TTTGGTCCAG AGCCCATTGT GGCGAAGCAA
GCGTTAACGG ATGCAACCCA TGAAGAGGAT CAATCAGACA ACGCGTCAGA AGAAGCTGCC
GATAAAAAGC AGCCTGCTAA AAACGATAGT GAGGCTAAAA CACAAAGCGC TGATGAAGCA
GCTGACAACA ATGCTGACAA CAAGGCTGAC AAAAATGCTG ACAATAAGCA AACTAAGGCT
GATAAAAAAA CTGAAGTAAG CGATGACGTG GCCGATCAAT TCGGTGAAGA GCCTACAGAT
CCCACCAAAG GTGCAGAAAC CCAAGAAAGC TATGACTTTC ACACACAAGA GGGGCAACCT
GCCAATGACG CTAAAAATGA CGCTAAAAAA GATCAAGCCA AATAG
|
|---|
| Protein sequence | MAKQSKSSKK SKAVVTGLDV LGHVARNNLE RFGSMLDSLS AKSGKASQFK AVDLSDYKTS
TASNLLSQQT IKTSEQLLGK RFATYGKYAK KVVPNSIYQK ASDSVFSQVA KLAATWSEID
LPREQRFEGI QTLSDQERNA LARDIANQNR ALATIGGVTG LAGLPGMLAD TLWLLLVSLR
TVYQLATVYD KPLTGKQGIK MAYAVIGSAD LSKMQEKQTI LAALGVAKGL ISNADNTGLR
SELSKGLGIA GSNIEFYAKQ VDKLAEQFNF DLDSINISWM GKFLPLVAVG TTVHYNSHLI
DQVIGVAKAT FGPEPIVAKQ ALTDATHEED QSDNASEEAA DKKQPAKNDS EAKTQSADEA
ADNNADNKAD KNADNKQTKA DKKTEVSDDV ADQFGEEPTD PTKGAETQES YDFHTQEGQP
ANDAKNDAKK DQAK
|
|---|
| |