| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0480 |
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| Symbol | |
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| ID | 5205550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 574538 |
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| End bp | 575632 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640598695 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_001279385 |
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| Protein GI | 148652292 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.632369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAAAT CCAACCGAAA ACCTGAGAAA AATGTAGATA AAATGAACAG TCAAAATAGC
AAGATAGAGC AAGATTTAGA AGGTCTAATG GCCAGCGTTG GCGCTGAGCC AACCCAAGTT
AGACGCCATT CTACCAAGGC TCGCCCACAA AGTGCCGATG AAGATATCAA GGATTTTGGA
CAGGTGAACC ACCTAGAGGT TACCCGTAAT CAACATGGCC AACGCATTGA TAATTTTTTG
TTAGCCAGAC TTAAAGGTAT GCCGCGCGCG CACATTTATA AGATGATTCG CTCAGATGAG
GTGCGTATTA ATAACAAGCG CTGTAAGCCT TATGACAATC TTGAGCGTGG CGATGTGGTG
CGTATTGCTC CTGTGAAACT GGCGACTCGC GAAAAACCAG TGATCAGCGA AGGCTTCGCT
AAAAGCTTAC TTGAGCGTGT GGTCTATGAA GATGAAGGGC TTATTGTGCT AAATAAGCCT
TCAGGCATGG CGGTACATGG TGGCAGCGGC CTAGATTTTG GGGTCATTGA AGCCATGCGT
GATGCCACTA GCAAAAAATA TTTGGAGCTG GTGCACCGCA TTGATAAAGA TACGTCAGGC
TTACTGATGA TTGCCAAAAA GCGCTCAACG CTTAAAGTTT TGCAAGAGTA TTTGCGTGAA
AAAACCATTC AAAAGCACTA TCTGTGCTTG GTAAAAGGGC AGCCGGCACT TAATGAGTTT
GAGATTGATG CGCCGTTATT ACGTTACACG GTGGCCAATG GTGAGCGCCG CGTAAAAGTA
GATAAAGCTA ATCCTGAAGC TAAGCTTAGT CAGACAACCT GCAAGGTGTT GGCCCGCTTT
AAGATGAACG GTGAGCCGGT GAGCTTAATA GAGGCCATGC CTCACACTGG ACGTACCCAT
CAAATCCGAG TGCATTTGGC GTATCTGGGT CACCCTATCT TAGGCGATGA CAAATACAAC
ATCAAAGATA CCTCAGGGGT TCGACGCTTA TGCCTACATG CTTGGCAGCT AGATGTGCCT
GAATATGAGG TGATTAAAGC GCCGCTGCCT GAGGATATGC AGTCGTTATT GCCTGCAGAT
TTTAAATTAG ATTAA
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| Protein sequence | MSKSNRKPEK NVDKMNSQNS KIEQDLEGLM ASVGAEPTQV RRHSTKARPQ SADEDIKDFG
QVNHLEVTRN QHGQRIDNFL LARLKGMPRA HIYKMIRSDE VRINNKRCKP YDNLERGDVV
RIAPVKLATR EKPVISEGFA KSLLERVVYE DEGLIVLNKP SGMAVHGGSG LDFGVIEAMR
DATSKKYLEL VHRIDKDTSG LLMIAKKRST LKVLQEYLRE KTIQKHYLCL VKGQPALNEF
EIDAPLLRYT VANGERRVKV DKANPEAKLS QTTCKVLARF KMNGEPVSLI EAMPHTGRTH
QIRVHLAYLG HPILGDDKYN IKDTSGVRRL CLHAWQLDVP EYEVIKAPLP EDMQSLLPAD
FKLD
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