| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0479 |
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| Symbol | |
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| ID | 5205373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 569147 |
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| End bp | 573253 |
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| Gene Length | 4107 bp |
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| Protein Length | 1368 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640598694 |
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| Product | ribonuclease |
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| Protein accession | YP_001279384 |
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| Protein GI | 148652291 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCA TACTGATTAA CGCCACCCAC AACGAAGAAG TTCGTGTCGC CTTATGTAAA
GGCAACCATT TATACGACTT CGATCTTGAA AACCGCACCC GCGAACAGAA AAAAGCCAAC
ATCTATAAAG GCCATGTCAC CCGCGTAGAG CCGTCATTAG AAGCCGTATT TGTCGAATAT
GGCTCAAAGC GTCAGGGCTT CTTGCCAGTG CGCGAAATTG CCAGCGAATA TCTGTCAGGC
AACCCTCGTG AAGAAAACAT CCGCAAGCTT ATCAAAGAAG GCGATGAGCT TATCGTGCAA
GTCGAAAAAG AAGAGCGTGG TAACAAAGGC GCCGCCCTAT CTACTTATGT GTCTTTGGCC
GGCCGCTATT TGGTATTAAT GCCAAACAAC CCGAAAGGCG GCGGTATCTC ACGTCAAATC
TCAGGCAAGC TGCGTGAAGA CATGAAGCGT ATGCTGGGTA ATTTAGATTT GCCAAAAGGG
ATGAGCGTTA TCGTACGTAC TGCTGGTATC GGCAAAACCC AAGAAGATTT GCAACACGAT
TTAAATCACC TGCTTAATAT CTGGAACGCC ATTCAAGATC AAAACAAAAA ATACGCCTCT
CCTCGTCTTG TACATCAAGA AGCGGGGGTG GTGACTCGTG CGGTACGCGA TTATCTACGT
GATGACATCA CTGAGATCTG GATTGATAAT GAAGAGGCAT TCATTGAGGC TGAGACCTTT
ATAAAAGCGG TTATGCCGAC TCAAATTGAT AAGCTGCGCA AGTACACTGA CTTTGAGCCT
ATGTTCTCAA GCTTCAACGT TGAGCGCCAA ATTGAAACCG CTTATCAGCG TGAAGTACGT
TTGCCCTCTG GTGGCTCAAT TGTTATTGAC CAAACCGAAG CCTTGGTCTC TATCGATATC
AACTCAGCCA AATCGACTAA AGGTGCGGAC GTCGCTGAGA CAGCCTATCA CACCAACTTA
GAGGCAGCCG ATGAGATTGC CCGTCAGCTG CGTCTGCGTG ATATGGGCGG CCTAATTGTT
ATCGACTTCA TTGATATGAA CGACAGCAAA CATCAAAAAG AAGTGGAAAA ACGTCTGGTT
GAAGCCACCA AATACGACCG TGCTCGTGTT CAGTTTGGGG AGATTTCACG CTTTGGTCTG
ATGGAAATGA GCCGTCAGCG CCTACGTCCT TCTTTAGAAG AGTCCACCGG CTATATCTGC
CCTCGCTGTC ATGGCAACGG TATGATTCGT GATTTACGTT CGTTATCACT GTCTATCATG
CGTCAAATTG AACAAACAGC CTTAAAAGAG CGTCATGGTG AGGTGCAAGC TGAAGTACCT
ACGGATATAG CAGCATTTTT ATTAAATGAA AAGCGTGAAA GCTTGGTGTA CCTTGAGCAA
GACAGCGGCA CCCGCATTAC TATCTTGCCA CATGCCCACC TTGAGTCGCC AAACTTCAAT
ATCCACTTTA ACCACCATGG CTTCGCACCC GCAAGCTATG AGCGTGTGAC CGATACTCAG
CAGCAAGAAA CCAGTGGCCT AGGCTATGAA GTGGACTGGC AAACTGCGGA ATCTGAGCGT
CCAGAGCAGC AGCCTGTGCG TCAGCCGCGC AAAACGGCGC CTCAAGCCAG CGCCGATACC
AGCAAGCCTG CCGAGGCCGC TAAAGCCGCT ACTCCTGTGG CCAACACCGC TGCCAAACCA
CAGCAGCCTG CCGAGGCCCA AGTAGAACAG GCCAAACCTG CTGCCGTGGC TTGGCTATCA
AACCTATTTG CCCCAACACC GCAAGCCCAG ATGTCAGCCA CAGTAAGCAG TGCTGATGCC
GCTCAAGCGA TTGAAGCCAT CGTTAATACC GGTGCGCAAA GCCGAGGCGC TTTTGGTCAA
GTAAGCGCCG CGCCAGCCGC TGCCCCTGTG GCTTCCGCTA CTGTAGCGGC CAAACCTGCC
TCTGCCCCTA CCGCTAGCGA GCAAGCCAAT AGCGCAGATG ACACTGAAAC CGATAATGAC
AAAGACCGTC GCCGCAGCCG CAACAACCGC AGCCGTAATA AATATGACAA GCGTAGCAAG
CCTGACAACC GTCGCCGCAG CCAAGACAAA GAAGACAAGA AGTCGGCTGA TACAGCAGAC
AAGTCAGACA ACCGTCAGGT AGCTGAGCAA GAGCCTAACA AAGAGCTGCC TAAGCGTGAG
CCTAATAGCA AACGTGAATC ACGTGGTGCT ATAGAGCGCG GTGACACCAA ACAGCCTAAC
AAGGCCAGCT CAGACAACCG CTCTGATCGT AATCAAAAAA CAGACGAAAA GTCACGCAGC
GCCGATAAAA ATGGCAGCCG CTCAAACTCT GAGCGTCCGG TTGACCCTAA TGAGGTGAAC
CTAAGAGTGA CTGAAGCACA GAACACTTTG AAAAAATCCG AAGTAGTGCA TATCTGTTTA
GATGACGCTA AATCAAGCCA AAAATCTGCA CAGGCTCAAA GTAAGCCTGA AGTGCAGCAA
GCGAGCCCTA ACAATCGCGC CGTAACTCGC CAGCAAAGCA CTCAAGCCGA GCCTCAAGCT
GACAACTCAA AGGCAGCTAA GTCTGAAGCT TCGCGTGACC ATAAGCCAAG CGATGACGCA
TCTGCAGCTC AGCCTAACAC GGCAGCTGTC ACAGAGGTGG CCGAACCAGC TTCTAATATG
AAAGATGGTG CTGCTCAAGG CGATCAAAAG CAAAAAGCCG ATACCAAGAC TGAGTCAGTC
GTGGCACCCT CAGTAAGCAA AGATGCTGAG CCCAAAGCGG ACCAGCCAGC TAAGGTGCAA
GCCAGCACAG CCCAGTCTGA ACCAGCTGAA GCGGTGATTG ATACTGAAGC GACTCCAGCC
AAAGCTGCCG CTAATAACGC TGCTCACGCT GCAAGATCCC CAGAGGAAGC AACTGCACAG
CCTGTTGTAG CCTCAGAAGA TCAGGCCCCT GAGACGGCAA GCTTAAGCTT TGATGCCAAA
GAGCTGTTTG CCAACCGCTA CGTGGCGGCG CAAAAATATG GTCAAGCCAG CAATGACCCG
CGTGTGATCA AAGCCTCTCT TGAAGCTCAA GCTCAGTCTT TTGCAGCGCC TGAAGCCGAT
GAGCCAGAGC TCTTAGCACC AATGGCTACG ATTACAGGCT CTGTGGGTCA ATTTATCCAC
ACTCACCTAG CCCAGCCACG TATGCGCTTG GCTAAAGATG GGGTAATTGC ATGCTTCTTA
GCGGCATTAA ATGCGCACAA GCAGACGTCA GGCAGTACAA CCAAGCCTGC TGCGAAGCGT
AAAGCCGCTG CTAATAACAG CAAGCAGCAC GCCAAGGCCT TTAGCTTCGT GAATTATGGC
TATCAGTCTT TATCACCCAG TTATCTAGAG CGCTTTGCCC AGATGACCTC AGCGGTAGCG
ACCCATACCA TCGAGCAAGG TAAGACTGAA GTTGAGCCAA GCCCAATTGG TGCGCGCGCC
TCAAATGACC CACGTGGCCA GCATCCGGAC TATACTGCCC CCGATGCTGC CTCTGACGCA
GTGACACAGC CTTTAGACAA TGGCTTAACT GCGGGCGATG TTAGCGATAC TGTGGAGGCG
ACACCGGCTC AAGCGGAGGC AGCGCCACAA GAAGTTAAGG ATTTAGCTCA GCTACTTACG
CTAAATGTCG GCCACTTTAT CCGTGAAATG CTCGGTCAAG AGGGCGTGGA CAGCATTGCA
GCGGGACACA CTGAAGCAGC TTTCTTAAAA GCCTTGCGTC AGCCGCTGCC AGTAGCCCAA
TCGGCCCAAA GCGCTAATGA TACGCTCTTA GAGGATACCG ACTCAAGCGC TGAGGCAACA
GTGCAGCAAG TAGCGGATGA GGCTCATGTT ACTGAAACCA TAGAGCAGCC GGCCACAGCG
TTAGTGAATG AGCCACAAGC CGATGCCATC AGTGATGACA GCACCGAGAT GTTACAAGCA
GCGCACCATG CTGCTAATAC GTCCAATAAA ACCAGTATTG AGACTTATAA GAGCATGATT
GAAAACATCT CAGAGCAGCT GCTGCCGCAA ACAGGACTGT TAAATCTAAC CTCGCCAAAA
GTGCCCAAAG CACGCTCGCG CAAGGTAAAA GAGGATGCCA AAAAGACCAC AGCCACCCCT
AAAGGCTCCA CCGATAGTGA CAGCTAA
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| Protein sequence | MKRILINATH NEEVRVALCK GNHLYDFDLE NRTREQKKAN IYKGHVTRVE PSLEAVFVEY
GSKRQGFLPV REIASEYLSG NPREENIRKL IKEGDELIVQ VEKEERGNKG AALSTYVSLA
GRYLVLMPNN PKGGGISRQI SGKLREDMKR MLGNLDLPKG MSVIVRTAGI GKTQEDLQHD
LNHLLNIWNA IQDQNKKYAS PRLVHQEAGV VTRAVRDYLR DDITEIWIDN EEAFIEAETF
IKAVMPTQID KLRKYTDFEP MFSSFNVERQ IETAYQREVR LPSGGSIVID QTEALVSIDI
NSAKSTKGAD VAETAYHTNL EAADEIARQL RLRDMGGLIV IDFIDMNDSK HQKEVEKRLV
EATKYDRARV QFGEISRFGL MEMSRQRLRP SLEESTGYIC PRCHGNGMIR DLRSLSLSIM
RQIEQTALKE RHGEVQAEVP TDIAAFLLNE KRESLVYLEQ DSGTRITILP HAHLESPNFN
IHFNHHGFAP ASYERVTDTQ QQETSGLGYE VDWQTAESER PEQQPVRQPR KTAPQASADT
SKPAEAAKAA TPVANTAAKP QQPAEAQVEQ AKPAAVAWLS NLFAPTPQAQ MSATVSSADA
AQAIEAIVNT GAQSRGAFGQ VSAAPAAAPV ASATVAAKPA SAPTASEQAN SADDTETDND
KDRRRSRNNR SRNKYDKRSK PDNRRRSQDK EDKKSADTAD KSDNRQVAEQ EPNKELPKRE
PNSKRESRGA IERGDTKQPN KASSDNRSDR NQKTDEKSRS ADKNGSRSNS ERPVDPNEVN
LRVTEAQNTL KKSEVVHICL DDAKSSQKSA QAQSKPEVQQ ASPNNRAVTR QQSTQAEPQA
DNSKAAKSEA SRDHKPSDDA SAAQPNTAAV TEVAEPASNM KDGAAQGDQK QKADTKTESV
VAPSVSKDAE PKADQPAKVQ ASTAQSEPAE AVIDTEATPA KAAANNAAHA ARSPEEATAQ
PVVASEDQAP ETASLSFDAK ELFANRYVAA QKYGQASNDP RVIKASLEAQ AQSFAAPEAD
EPELLAPMAT ITGSVGQFIH THLAQPRMRL AKDGVIACFL AALNAHKQTS GSTTKPAAKR
KAAANNSKQH AKAFSFVNYG YQSLSPSYLE RFAQMTSAVA THTIEQGKTE VEPSPIGARA
SNDPRGQHPD YTAPDAASDA VTQPLDNGLT AGDVSDTVEA TPAQAEAAPQ EVKDLAQLLT
LNVGHFIREM LGQEGVDSIA AGHTEAAFLK ALRQPLPVAQ SAQSANDTLL EDTDSSAEAT
VQQVADEAHV TETIEQPATA LVNEPQADAI SDDSTEMLQA AHHAANTSNK TSIETYKSMI
ENISEQLLPQ TGLLNLTSPK VPKARSRKVK EDAKKTTATP KGSTDSDS
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