| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0462 |
|---|
| Symbol | |
|---|
| ID | 5205423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 546373 |
|---|
| End bp | 546960 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640598677 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001279367 |
|---|
| Protein GI | 148652274 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.800069 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTAT TTAAGGCTGT GCCATGGATC CATATGCACG ATAGGCTTGC CAAGCCACTG
TTAAATGGGA CGTTCATATA TGGAGTAAGT GTGGCGGCGC TTGGCCTAGG TGTTGCTCTG
CCAGCTTGGG CCATGCCGGT GTATAAAACT ACGGGAGAAT TTGGTGAGGT AAAGTACTCA
CAATTTGCAC CTAACTTTGC ACCTGACTTT GCACCTGACA TAGGCACTCA GGTTGAAATC
ATACAGATGA GAGGTGACGG CCGGCCCAGT AAGCCAGGTC AATTCTCCGC CCCTGTCGCG
CCGCCTCAGA CCAATACGTC AACCCAGCCT AAGTCGTCTT TTACTGCACC TTTATTGTCA
TCTTCAGGCA GCACCACTGC AAAAAACAAC CAAGCCCCTC ACCCTTCCAA GACTTTGGAC
CCAACCATTC AGACCCAATG TAAAAAGCTG CAAGTTAATT TAATGCACTT AACCACAGGC
GATGAGGTAT ATACGCTCAA TGCTACTGGC CAAAGAGTCT ATCTAACCGC CCCTATGATT
GAGCTAAAGC GAGAAAATAC CGAGCAACTA TTGGCACAGT ACTGCTAG
|
|---|
| Protein sequence | MNLFKAVPWI HMHDRLAKPL LNGTFIYGVS VAALGLGVAL PAWAMPVYKT TGEFGEVKYS
QFAPNFAPDF APDIGTQVEI IQMRGDGRPS KPGQFSAPVA PPQTNTSTQP KSSFTAPLLS
SSGSTTAKNN QAPHPSKTLD PTIQTQCKKL QVNLMHLTTG DEVYTLNATG QRVYLTAPMI
ELKRENTEQL LAQYC
|
|---|
| |