Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0454 |
Symbol | |
ID | 5206101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 538809 |
End bp | 539456 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640598669 |
Product | hypothetical protein |
Protein accession | YP_001279359 |
Protein GI | 148652266 |
COG category | [R] General function prediction only |
COG ID | [COG1399] Predicted metal-binding, possibly nucleic acid-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.180134 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.312368 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGATA TCATTTTAAA AAAAGAGAGA AGTATGACAA AATACACCAA GGATACTAAA TCCACTAACT TAACGGATTT GAACGTGAGC AATAATACTG AAAAAAGTGC ACAGCAGTTA CCTAATCACG TCAATTTAGA GAAGTGGGAA GATGCCGGCT ATGTTTGGTC CGGTAGCATT ACCCCACGTC TGCTAAAGCG ATTGGTAGAT ATTGTCCCTG AAGACTATCA AGATAAGCCC ATTGACTTAA GATGTGAGCT GAAAAAACAA GGTCAGCTAT TGACCTTAGA GATGCAGTTC ACAGGTGATA TTTGGGTGAC GTGTCAGCGC TGTCTTAATC CACTGAACAT CGATGTCACT CACGATGCGC AGCTGATACT ATTACAGCGT GAAGAGCAAG AAAGCTTGGT GGATGAGTCC GATGATTATC TGCTGCTAGA GGAGCTGCTC GCCGATCAGC CTGAGAATAA AAAAGGCGAT CGCCTGCTAC CACTAAAAAA ACTGGTCGAG GATGAGTTGC TGTTAGATGT CCCTTTATCT GCCAAACATG ATGATTGTGA AATGGCAGTA GAGCAGGTCG GTGAAATTAT CGAAGAGGAG GCAGAAAACC CGTTTGCCGC ACTCGAAGCA CTCAAAGGTA AGCTTTAA
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Protein sequence | MSDIILKKER SMTKYTKDTK STNLTDLNVS NNTEKSAQQL PNHVNLEKWE DAGYVWSGSI TPRLLKRLVD IVPEDYQDKP IDLRCELKKQ GQLLTLEMQF TGDIWVTCQR CLNPLNIDVT HDAQLILLQR EEQESLVDES DDYLLLEELL ADQPENKKGD RLLPLKKLVE DELLLDVPLS AKHDDCEMAV EQVGEIIEEE AENPFAALEA LKGKL
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