| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0441 |
|---|
| Symbol | rplF |
|---|
| ID | 5204839 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 530219 |
|---|
| End bp | 530752 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640598656 |
|---|
| Product | 50S ribosomal protein L6 |
|---|
| Protein accession | YP_001279346 |
|---|
| Protein GI | 148652253 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0097] Ribosomal protein L6P/L9E |
|---|
| TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000000296356 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.000109216 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCGTG TGGCTAAAGC CCCAGTAGCA CTGCCTAATG GCGTAAGTGT TACTTTGAAC
GGTCAGCAGG TTGAAGTTAA AGGCAGTAAA GGTACTATGT CTTTACACCT GCATGATTTG
GTCGAGCTAA AACAAGAAGA TAGTCAACTG ATCTTATCAC CTGTTTCTGA CTCTAAAGAA
GCTTGGATGC ACACTGGTAC TATGCGTTCA ACTTTGAATA ACTTCGTTAT CGGTGTTTCT
GAAGGTTTTG AAAGAAAACT TCAGTTGATT GGTGTTGGTT ACCGTGCACA AGTTGCGGGT
AATAAAATCA CCCTAAACGT AGGTTACTCA CATCCAGTTG AATACATCCT TCCTGAAGGT
GTAACTGCTG AAACGCCAAG CCAAACTGAA ATCATTTTAA AATCAAATGA TAAGCAGGCA
CTAGGTCAAG CTGCTGCGAA AATCCGTGGT TATCGTCCGC CTGAGCCATA TAAAGGTAAA
GGTATTCGCT ATAGTGACGA GCATGTGGTT CGTAAAGAAG CTAAGAAAAA ATAA
|
|---|
| Protein sequence | MSRVAKAPVA LPNGVSVTLN GQQVEVKGSK GTMSLHLHDL VELKQEDSQL ILSPVSDSKE
AWMHTGTMRS TLNNFVIGVS EGFERKLQLI GVGYRAQVAG NKITLNVGYS HPVEYILPEG
VTAETPSQTE IILKSNDKQA LGQAAAKIRG YRPPEPYKGK GIRYSDEHVV RKEAKKK
|
|---|
| |