| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0431 |
|---|
| Symbol | rplV |
|---|
| ID | 5206257 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 525919 |
|---|
| End bp | 526248 |
|---|
| Gene Length | 330 bp |
|---|
| Protein Length | 109 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640598646 |
|---|
| Product | 50S ribosomal protein L22 |
|---|
| Protein accession | YP_001279336 |
|---|
| Protein GI | 148652243 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0091] Ribosomal protein L22 |
|---|
| TIGRFAM ID | [TIGR01044] ribosomal protein L22, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000000491035 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00000564548 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGTAA CTGCAAAATT ACGCGGTGCC GCCATTTCGG CACAGAAAGT TCGACTTGTC
GCAGATGAAG TTCGTGGTAA GTCTATTGAG CGTGCTTTGG ATATCCTTGC GTTCAGCAAT
AAAAAAGGCG CAGTATTCGT TAAGAAATGT CTTGAGTCTG CTATCGCAAA CGCTGAACAC
AACCACGGTT TAGATATCGA TACGCTTAAA GTATCAACTA TCTATGTGGA TGAAGGCATC
ACGCTAAAGC GTATCCTACC ACGTGCAAAG GGTCGTGCTG ATCGTATCAG TAAACGTACC
TGTCACATCA CTGTTAAGGT AGGAGAATAA
|
|---|
| Protein sequence | MEVTAKLRGA AISAQKVRLV ADEVRGKSIE RALDILAFSN KKGAVFVKKC LESAIANAEH
NHGLDIDTLK VSTIYVDEGI TLKRILPRAK GRADRISKRT CHITVKVGE
|
|---|
| |