Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0422 |
Symbol | |
ID | 5205317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 518955 |
End bp | 519443 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640598637 |
Product | hypothetical protein |
Protein accession | YP_001279327 |
Protein GI | 148652234 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03426] rod shape-determining protein MreD |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000422258 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0000312258 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATCAAGT CTCCCTTAAG CCCGTTACAA TCTTTGCTGT TGGTTATTGC AAGTTTTGTG GCGGCTTCTG TCGTTAATAT CTACCCGCTT AGTTTGGATG CCTCGAAGCT ACGGCCCATG GCACTTATTA TGGTGCTTAT TTTTTGGCTT ATCTATAAAC CGCGCTATGT GGGGGTGGTG ACCGCTTTTG CCATTGGTAT TATCTCAGAC TTGTTGTTAG ATACCCGCTT AGGGCAGCAG GGATTTGCGG CAGTGATTAT GGCGTTTTCG CTACGTTTTG TTGGGCAGTA TATCAAGCAA GTTAATCTGC CCGTTGCTTG GACGGTGGCG ACAGGGGCAC TTATCGTGTT TCAGCTGACG TTATGGATTG TGCAATACCT GACCCAGAAC ATATTTTATG CCAGTGCAAT TTTTAGCTTA TTGGTCAGTG TCATTAGCTG GCCGTTGGTA TTTTTTGGAT TGCACCGTTT TATCAACAAG TATTCATAG
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Protein sequence | MIKSPLSPLQ SLLLVIASFV AASVVNIYPL SLDASKLRPM ALIMVLIFWL IYKPRYVGVV TAFAIGIISD LLLDTRLGQQ GFAAVIMAFS LRFVGQYIKQ VNLPVAWTVA TGALIVFQLT LWIVQYLTQN IFYASAIFSL LVSVISWPLV FFGLHRFINK YS
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