Gene PsycPRwf_0420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0420 
Symbol 
ID5205813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp516770 
End bp517798 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content48% 
IMG OID640598635 
Productrod shape-determining protein MreB 
Protein accessionYP_001279325 
Protein GI148652232 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1077] Actin-like ATPase involved in cell morphogenesis 
TIGRFAM ID[TIGR00904] cell shape determining protein, MreB/Mrl family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0445177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000156302 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACCCGT TTGGATTTCT ATCTAACAAT ATCGCCATTG ACCTTGGTAC TGCCAACACA 
TTGATTTATG CGCCTGGAAA GGGTGTGGTT CTCGACGAGC CCACGGTAGT GGCTCTGCGT
AGTAATCGCA CTCAAAATCC AACGGTAGCT GCTGTCGGCA TCGATGCAAA GCAAATGCTG
GGTCGTACAC CGGACAATAT CACCGCCATT CGCCCGTTAA AAGATGGGGT TATTGCAGAT
TTTGAGGTCA CTCAAAAAAT GCTAAAACAC TTCATCAATA AAGTAAAAGC GCGTCGCTTT
TTGGCTCAGC CAAACGTTGT GGTTTGTGTG CCTTGCAAAT CGACCTTAGT TGAGCGTCGT
GCCATTCGTG AAGCGGTATC TTCTGCTGGC GCCAACAAAG TCTTTTTATT AGAAGAGCCG
ATGGCAGCTG CCATTGGTGC CGACCTGCCA GTGCATGAAG CCAGTGGCTC TATGGTTGTG
GATATCGGTG GTGGTACCAC TGAGATTGCC GTCATCTCAT TATCAGGCTG CGTCTATGCC
GACTCTATCC GTATCGGCGG CGACATCTTT GATGAGGCGA TTATCACGCA CGTTCGCCGC
AATCATGGCT GCGTAATTGG TGAAACCACA GCTGAGCGTA TCAAGCAAAG CGTAGGCTCG
GCCATTGATG AAGATGCCAA GCTTGAAGTT GAAGTGCGCG GCCGTAGTAT GGCTGAAGGG
GTGCCTAAGA CCTTAACGGT GACCTCTGAA GAAGTTCAAA AGGCATTAAG CGACTCATTA
ACCGGTATTG TTAGTGCGGT AAAAACTGCC CTAGAACAGA CGCCACCTGA ATTGTCATCA
GACATCGCTG AGCGTGGTAT CGTGTTAACC GGTGGCGGCG CTTTGTTGCG TAACTTTGAT
AAATTATTGT CAAAAGAAAC CGGTCTACCG GTTACCGTTG CAGAAGACCC CTTAACGTGT
GTGAGCCGTG GCGGCGGTGC TGCATTAGCA TTTATCAATA ATAAAAGTCT TAATATGATT
TTTGTGTAG
 
Protein sequence
MNPFGFLSNN IAIDLGTANT LIYAPGKGVV LDEPTVVALR SNRTQNPTVA AVGIDAKQML 
GRTPDNITAI RPLKDGVIAD FEVTQKMLKH FINKVKARRF LAQPNVVVCV PCKSTLVERR
AIREAVSSAG ANKVFLLEEP MAAAIGADLP VHEASGSMVV DIGGGTTEIA VISLSGCVYA
DSIRIGGDIF DEAIITHVRR NHGCVIGETT AERIKQSVGS AIDEDAKLEV EVRGRSMAEG
VPKTLTVTSE EVQKALSDSL TGIVSAVKTA LEQTPPELSS DIAERGIVLT GGGALLRNFD
KLLSKETGLP VTVAEDPLTC VSRGGGAALA FINNKSLNMI FV