Gene PsycPRwf_0410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0410 
Symbol 
ID5205481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp501751 
End bp502437 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content46% 
IMG OID640598624 
ProductGTP cyclohydrolase II 
Protein accessionYP_001279315 
Protein GI148652222 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00505] GTP cyclohydrolase II 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0177534 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCAAC TACCTTCAAC AAACGAAACT CACTCTCCTT ATAAATTCAT CAGTAAAGCC 
CGTCTCCCAA CGGCGCATGG TCAATTTGAT ATCCACGTGT TTGAGAATGC AGAAGGCCAA
GAGCATGTTA TGCTCACTTG CGGCTTGCCG ACTGATAACA CTGATGATGT AGCCAATAAA
GAGAAACTAC CACCTTTGGT GCGTATCCAT TCTGAGTGTC TAACTGGTGA TGCTTTTTCC
TCTTTAAAAT GTGACTGCGG TCCCCAGCTA AATGCAACGA TGCAGGCCAT ACAACAAGAA
GGATGTGGCG CTATTTTGTA TTTGCGTCAA GAGGGGCGCG GTATTGGACT GACCAATAAA
ATCCGAGCTT ATGCGCTACA AGATCAAGGG CACGATACAC TCGATGCCAA CCTGTTGCTT
GGCCTACCCG CTGATGCCAG AACGTATGAA ATGTGTAAGC CCATGCTCGA TCATGTGGGC
ATCAGCAAGC TGCGTCTTAT GACCAACAAT CCAGATAAAC TCAGCTATCT AGAAGACTTA
GGCTTTGAGG TGGTGGAGCG TATTCCGCTA GTAGTGGGAC TTAATCCTTT TAATGTGGAT
TATTTGGCCA CCAAGCGTGA GCGCATGGGT CATCATTTGA ACAATGACAT CTCCTCTTTA
GTATTTAAGC CCATCTCGGA GCAATAA
 
Protein sequence
MSQLPSTNET HSPYKFISKA RLPTAHGQFD IHVFENAEGQ EHVMLTCGLP TDNTDDVANK 
EKLPPLVRIH SECLTGDAFS SLKCDCGPQL NATMQAIQQE GCGAILYLRQ EGRGIGLTNK
IRAYALQDQG HDTLDANLLL GLPADARTYE MCKPMLDHVG ISKLRLMTNN PDKLSYLEDL
GFEVVERIPL VVGLNPFNVD YLATKRERMG HHLNNDISSL VFKPISEQ